Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm22660-201ENSMUST00000104193 130 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm12599-201ENSMUST00000120534 792 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm15079-201ENSMUST00000121943 216 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm2951-201ENSMUST00000169447 490 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm21181-201ENSMUST00000186249 330 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm28164-201ENSMUST00000190143 442 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm34583-203ENSMUST00000202586 454 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm44192-201ENSMUST00000204195 556 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 CT572999.1-201ENSMUST00000220315 1260 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Cchcr1Q8K2I2 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.71□□□□□ -1.01
Cchcr1Q8K2I2 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm11838-201ENSMUST00000121999 231 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm6428-201ENSMUST00000161062 345 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm4781-201ENSMUST00000167995 781 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Mir8095-201ENSMUST00000185103 129 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Mir6919-201ENSMUST00000185146 62 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm29008-201ENSMUST00000189387 298 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm44356-201ENSMUST00000196731 111 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm20223-201ENSMUST00000199932 805 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cchcr1Q8K2I2 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Gm12710-201ENSMUST00000119011 216 ntBASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Gm22795-201ENSMUST00000157233 118 ntBASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cchcr1Q8K2I2 Gm8046-201ENSMUST00000172151 616 ntBASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms