Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm45198-201ENSMUST00000206796 591 ntBASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm7394-201ENSMUST00000209138 1032 ntBASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 AC164294.1-201ENSMUST00000224682 688 ntBASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 AC166574.5-201ENSMUST00000227438 1432 ntBASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm42679-201ENSMUST00000197086 2906 ntBASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm37534-201ENSMUST00000194483 5222 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm37891-201ENSMUST00000195585 1326 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 AC154522.1-201ENSMUST00000224647 1903 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm24284-201ENSMUST00000104240 142 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm11865-201ENSMUST00000118093 859 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm12331-201ENSMUST00000119927 622 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm11343-201ENSMUST00000120579 599 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm7502-201ENSMUST00000169235 733 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm3121-201ENSMUST00000187086 406 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm20690-202ENSMUST00000195126 355 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm38079-201ENSMUST00000195603 154 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm18469-201ENSMUST00000208850 439 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gcnt2-204ENSMUST00000223570 335 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 AV026068-229ENSMUST00000225516 595 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 AC158981.1-201ENSMUST00000226943 1205 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 AC156645.1-201ENSMUST00000223066 5194 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm10601-201ENSMUST00000120436 1422 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm2108-201ENSMUST00000165058 2177 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 CT025619.3-201ENSMUST00000216299 3267 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm38386-201ENSMUST00000194293 3421 ntBASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ccdc60Q8C4J0 Gm12608-201ENSMUST00000122013 1715 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm4962-201ENSMUST00000199640 2977 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm37163-201ENSMUST00000195439 1690 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm37067-201ENSMUST00000195730 1628 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm12710-201ENSMUST00000119011 216 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm13545-201ENSMUST00000119044 482 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm27218-201ENSMUST00000183745 392 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm27373-201ENSMUST00000184017 184 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm42734-201ENSMUST00000201656 878 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm4605-201ENSMUST00000203148 625 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm44044-201ENSMUST00000205178 1089 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm8058-201ENSMUST00000217247 587 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 AC159205.2-201ENSMUST00000223759 816 ntBASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 327.5 ms