Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trub1Q8C0D0 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trub1Q8C0D0 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trub1Q8C0D0 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trub1Q8C0D0 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trub1Q8C0D0 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC7.61□□□□□ -1.19
Trub1Q8C0D0 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trub1Q8C0D0 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trub1Q8C0D0 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trub1Q8C0D0 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trub1Q8C0D0 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm25276-201ENSMUST00000104300 124 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm26729-201ENSMUST00000180744 352 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm29240-201ENSMUST00000187248 286 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm29435-201ENSMUST00000191310 689 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm37295-201ENSMUST00000192186 109 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm8077-201ENSMUST00000209221 1024 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 AC154461.4-201ENSMUST00000224878 468 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trub1Q8C0D0 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm23484-201ENSMUST00000104178 131 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm24139-201ENSMUST00000122780 288 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm7991-201ENSMUST00000168668 591 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm6536-201ENSMUST00000171180 615 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm17973-201ENSMUST00000174509 520 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm26455-201ENSMUST00000175300 92 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm20797-201ENSMUST00000177894 383 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Mir6409-201ENSMUST00000184957 92 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Txn-ps1-201ENSMUST00000186385 309 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm4270-201ENSMUST00000209666 406 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Zfp874a-208ENSMUST00000225479 1092 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Grik1-210ENSMUST00000228034 2708 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.59□□□□□ -1.19
Trub1Q8C0D0 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trub1Q8C0D0 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms