Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Usp47Q8BY87 AC155298.3-201ENSMUST00000225307 3220 ntBASIC10.42□□□□□ -0.74
Usp47Q8BY87 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Gm38262-201ENSMUST00000194760 1382 ntBASIC10.42□□□□□ -0.74
Usp47Q8BY87 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Gm15575-201ENSMUST00000119414 1581 ntBASIC10.42□□□□□ -0.74
Usp47Q8BY87 Gm8844-201ENSMUST00000119460 2614 ntBASIC10.42□□□□□ -0.74
Usp47Q8BY87 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Usp47Q8BY87 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Gm14904-201ENSMUST00000117067 335 ntBASIC10.41□□□□□ -0.74
Usp47Q8BY87 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC10.41□□□□□ -0.74
Usp47Q8BY87 Gm11726-201ENSMUST00000121028 424 ntBASIC10.41□□□□□ -0.74
Usp47Q8BY87 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC10.41□□□□□ -0.74
Usp47Q8BY87 Gm2976-201ENSMUST00000160362 513 ntBASIC10.41□□□□□ -0.74
Usp47Q8BY87 Gm7244-201ENSMUST00000164658 455 ntBASIC10.41□□□□□ -0.74
Usp47Q8BY87 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Gm21048-201ENSMUST00000202470 1166 ntBASIC10.41□□□□□ -0.74
Usp47Q8BY87 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC10.41□□□□□ -0.74
Usp47Q8BY87 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC10.41□□□□□ -0.74
Usp47Q8BY87 AC133598.4-201ENSMUST00000224577 454 ntBASIC10.41□□□□□ -0.74
Usp47Q8BY87 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC10.41□□□□□ -0.74
Usp47Q8BY87 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Usp47Q8BY87 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm26729-201ENSMUST00000180744 352 ntBASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm44722-201ENSMUST00000206473 436 ntBASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm9604-201ENSMUST00000211175 433 ntBASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm45725-201ENSMUST00000212962 337 ntBASIC10.4□□□□□ -0.74
Usp47Q8BY87 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm19217-201ENSMUST00000218238 328 ntBASIC10.4□□□□□ -0.74
Usp47Q8BY87 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 AC155834.1-201ENSMUST00000220033 498 ntBASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC10.4□□□□□ -0.74
Usp47Q8BY87 AC154828.1-201ENSMUST00000220696 2810 ntBASIC10.4□□□□□ -0.74
Usp47Q8BY87 CT009711.2-202ENSMUST00000224538 973 ntBASIC10.4□□□□□ -0.74
Usp47Q8BY87 AC164294.1-201ENSMUST00000224682 688 ntBASIC10.4□□□□□ -0.74
Usp47Q8BY87 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Usp47Q8BY87 Gm29761-201ENSMUST00000215964 1939 ntBASIC10.4□□□□□ -0.74
Usp47Q8BY87 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Usp47Q8BY87 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Usp47Q8BY87 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Usp47Q8BY87 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm12635-201ENSMUST00000117285 752 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm11903-201ENSMUST00000118958 727 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm15153-201ENSMUST00000119867 274 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm25281-201ENSMUST00000157270 104 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 AC156574.1-201ENSMUST00000227084 452 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms