Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm8667-201ENSMUST00000211112 449 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Gm7151-201ENSMUST00000211511 954 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
ClpbQ60649 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
ClpbQ60649 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
ClpbQ60649 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.22□□□□□ -1.25
ClpbQ60649 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
ClpbQ60649 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
ClpbQ60649 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.22□□□□□ -1.25
ClpbQ60649 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
ClpbQ60649 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.22□□□□□ -1.25
ClpbQ60649 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
ClpbQ60649 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
ClpbQ60649 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.25
ClpbQ60649 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
ClpbQ60649 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
ClpbQ60649 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.21□□□□□ -1.25
ClpbQ60649 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
ClpbQ60649 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
ClpbQ60649 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC7.21□□□□□ -1.25
ClpbQ60649 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
ClpbQ60649 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
ClpbQ60649 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
ClpbQ60649 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Gm23834-201ENSMUST00000104436 129 ntBASIC7.21□□□□□ -1.26
ClpbQ60649 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC7.21□□□□□ -1.26
ClpbQ60649 Gm8988-201ENSMUST00000155015 1240 ntBASIC7.21□□□□□ -1.26
ClpbQ60649 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.21□□□□□ -1.26
ClpbQ60649 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
ClpbQ60649 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC7.21□□□□□ -1.26
ClpbQ60649 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC7.21□□□□□ -1.26
ClpbQ60649 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
ClpbQ60649 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC7.21□□□□□ -1.26
ClpbQ60649 Gm7369-201ENSMUST00000192738 936 ntBASIC7.21□□□□□ -1.26
ClpbQ60649 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.21□□□□□ -1.26
ClpbQ60649 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.21□□□□□ -1.26
ClpbQ60649 Gm7392-201ENSMUST00000217815 345 ntBASIC7.21□□□□□ -1.26
ClpbQ60649 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.21□□□□□ -1.26
ClpbQ60649 Zfp874a-208ENSMUST00000225479 1092 ntBASIC7.21□□□□□ -1.26
ClpbQ60649 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
ClpbQ60649 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
ClpbQ60649 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ClpbQ60649 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
ClpbQ60649 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ClpbQ60649 Gm45512-201ENSMUST00000210432 1553 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
ClpbQ60649 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
ClpbQ60649 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ClpbQ60649 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ClpbQ60649 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
ClpbQ60649 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ClpbQ60649 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
ClpbQ60649 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
ClpbQ60649 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ClpbQ60649 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ClpbQ60649 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
ClpbQ60649 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
ClpbQ60649 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
ClpbQ60649 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ClpbQ60649 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
ClpbQ60649 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
ClpbQ60649 Gm25725-201ENSMUST00000104528 130 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Gm22152-201ENSMUST00000116966 125 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Gm15081-201ENSMUST00000119794 844 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Gm13163-201ENSMUST00000119875 336 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Gm14826-201ENSMUST00000121284 901 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.2□□□□□ -1.26
ClpbQ60649 Gm24824-201ENSMUST00000175097 78 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Gm22132-201ENSMUST00000175316 100 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Gm37585-201ENSMUST00000195440 280 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 Gm37973-201ENSMUST00000195767 1289 ntBASIC7.2□□□□□ -1.26
ClpbQ60649 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms