Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm5931-201ENSMUST00000121308 477 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Gm12634-201ENSMUST00000122157 992 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC8.78□□□□□ -1
Gm28047Q3US59 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Gm28047Q3US59 Gm24994-201ENSMUST00000157414 121 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Gm23760-201ENSMUST00000158350 116 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Gm22949-201ENSMUST00000158562 105 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Gm24824-201ENSMUST00000175097 78 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC8.78□□□□□ -1
Gm28047Q3US59 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC8.78□□□□□ -1
Gm28047Q3US59 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.78□□□□□ -1
Gm28047Q3US59 Trbv27-201ENSMUST00000193711 277 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC8.78□□□□□ -1
Gm28047Q3US59 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC8.78□□□□□ -1
Gm28047Q3US59 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC8.78□□□□□ -1
Gm28047Q3US59 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 AC092710.1-201ENSMUST00000221005 192 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC8.78□□□□□ -1
Gm28047Q3US59 Gm34165-201ENSMUST00000222012 1174 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Gm2915-201ENSMUST00000222565 787 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 CT009550.2-201ENSMUST00000228851 399 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC8.78□□□□□ -1
Gm28047Q3US59 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC8.78□□□□□ -1
Gm28047Q3US59 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC8.78□□□□□ -1
Gm28047Q3US59 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC8.78□□□□□ -1
Gm28047Q3US59 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC8.78□□□□□ -1
Gm28047Q3US59 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
Gm28047Q3US59 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Gm28047Q3US59 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Gm28047Q3US59 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC8.78□□□□□ -1
Gm28047Q3US59 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Gm28047Q3US59 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Gm28047Q3US59 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Gm28047Q3US59 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Gm28047Q3US59 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Gm28047Q3US59 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.77□□□□□ -1
Gm28047Q3US59 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm24334-201ENSMUST00000104210 128 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm13160-201ENSMUST00000118441 627 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm15062-201ENSMUST00000120567 367 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm12583-201ENSMUST00000120677 853 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm14054-201ENSMUST00000120744 704 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm11933-201ENSMUST00000121550 375 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm22811-201ENSMUST00000157468 154 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm7412-201ENSMUST00000191692 605 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm31123-201ENSMUST00000192094 666 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Pisrt1-201ENSMUST00000195532 515 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm4259-201ENSMUST00000206489 758 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm9249-201ENSMUST00000221420 578 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm18629-201ENSMUST00000222496 884 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 AC154760.1-201ENSMUST00000227218 673 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Gm6786-201ENSMUST00000203165 1915 ntBASIC8.77□□□□□ -1.01
Gm28047Q3US59 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Gm28047Q3US59 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms