Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm22143-201ENSMUST00000157401 203 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm24838-201ENSMUST00000158684 130 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm24083-201ENSMUST00000175174 120 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Mir6357-201ENSMUST00000184246 104 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.8□□□□□ -1.32
Col8a1Q00780 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm38014-201ENSMUST00000193349 2612 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm37995-201ENSMUST00000194958 1714 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm43629-201ENSMUST00000201782 704 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm44763-201ENSMUST00000208287 2019 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 AC105169.1-201ENSMUST00000218912 1294 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 AC166341.5-201ENSMUST00000222206 1400 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Nme8-201ENSMUST00000039340 1704 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 CT009723.1-201ENSMUST00000215057 1803 ntTSL 5 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Enox2-205ENSMUST00000114918 3226 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC6.8□□□□□ -1.32
Col8a1Q00780 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gsdmc2-203ENSMUST00000188691 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm10472-201ENSMUST00000193014 2102 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Abhd4-202ENSMUST00000180359 2508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Orc1-201ENSMUST00000102744 3014 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm24462-201ENSMUST00000102430 106 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm6275-201ENSMUST00000118971 1122 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm12375-201ENSMUST00000119331 921 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm14900-201ENSMUST00000120304 733 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm12096-201ENSMUST00000121149 829 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm7599-201ENSMUST00000121453 796 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm12634-201ENSMUST00000122157 992 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm22818-201ENSMUST00000157446 104 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm22817-201ENSMUST00000157448 356 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Scarna17-201ENSMUST00000158064 79 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm7651-201ENSMUST00000173398 901 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC6.79□□□□□ -1.32
Col8a1Q00780 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm18984-201ENSMUST00000193998 1124 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm37987-201ENSMUST00000194999 825 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms