Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC7.72□□□□□ -1.17
Cxcl12P40224 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Cxcl12P40224 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Cxcl12P40224 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Cxcl12P40224 Gm38123-201ENSMUST00000194990 2779 ntBASIC7.71□□□□□ -1.17
Cxcl12P40224 Gm42811-201ENSMUST00000201951 2768 ntBASIC7.71□□□□□ -1.17
Cxcl12P40224 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Cxcl12P40224 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Cxcl12P40224 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Cxcl12P40224 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.17
Cxcl12P40224 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Cxcl12P40224 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.17
Cxcl12P40224 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Cxcl12P40224 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC7.71□□□□□ -1.17
Cxcl12P40224 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Olfr531-202ENSMUST00000216053 2330 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm26417-201ENSMUST00000104274 135 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm2178-201ENSMUST00000104927 357 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm26183-201ENSMUST00000157685 139 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm22530-201ENSMUST00000158820 118 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm3760-201ENSMUST00000167475 804 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm8183-201ENSMUST00000183134 980 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm2860-201ENSMUST00000199226 707 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm44192-201ENSMUST00000204195 556 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm8575-201ENSMUST00000210262 521 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm10126-201ENSMUST00000221732 168 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm18620-201ENSMUST00000222295 324 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm18960-201ENSMUST00000222962 713 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 AC156559.2-201ENSMUST00000224403 384 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.71□□□□□ -1.18
Cxcl12P40224 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Cxcl12P40224 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm10118-201ENSMUST00000079279 2569 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Cxcl12P40224 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Cxcl12P40224 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Cxcl12P40224 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cxcl12P40224 4930571K23Rik-201ENSMUST00000166958 2153 ntBASIC7.7□□□□□ -1.18
Cxcl12P40224 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cxcl12P40224 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cxcl12P40224 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC7.7□□□□□ -1.18
Cxcl12P40224 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm15127-202ENSMUST00000101190 1972 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Cxcl12P40224 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC7.7□□□□□ -1.18
Cxcl12P40224 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cxcl12P40224 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.7□□□□□ -1.18
Cxcl12P40224 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Cxcl12P40224 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm13176-201ENSMUST00000117910 477 ntBASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm4773-201ENSMUST00000120392 702 ntBASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm15192-201ENSMUST00000121005 293 ntBASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm26480-201ENSMUST00000122619 297 ntBASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.7□□□□□ -1.18
Cxcl12P40224 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm23903-201ENSMUST00000157566 131 ntBASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm25556-201ENSMUST00000158077 144 ntBASIC7.7□□□□□ -1.18
Cxcl12P40224 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm9285-201ENSMUST00000177691 697 ntBASIC7.7□□□□□ -1.18
Cxcl12P40224 Gm27034-201ENSMUST00000182552 940 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms