Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC6□□□□□ -1.45
Hmgb3O54879 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC6□□□□□ -1.45
Hmgb3O54879 Gm18024-201ENSMUST00000218516 690 ntBASIC6□□□□□ -1.45
Hmgb3O54879 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Hmgb3O54879 AC163041.2-201ENSMUST00000223082 573 ntBASIC6□□□□□ -1.45
Hmgb3O54879 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hmgb3O54879 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Hmgb3O54879 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC6□□□□□ -1.45
Hmgb3O54879 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC6□□□□□ -1.45
Hmgb3O54879 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC6□□□□□ -1.45
Hmgb3O54879 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6□□□□□ -1.45
Hmgb3O54879 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Hmgb3O54879 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Hmgb3O54879 Gm45876-201ENSMUST00000212698 2709 ntBASIC6□□□□□ -1.45
Hmgb3O54879 Gm14849-201ENSMUST00000122293 2846 ntBASIC6□□□□□ -1.45
Hmgb3O54879 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC6□□□□□ -1.45
Hmgb3O54879 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Hmgb3O54879 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Hmgb3O54879 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 AC156636.1-201ENSMUST00000218639 2229 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm21036-201ENSMUST00000207544 2611 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm44130-201ENSMUST00000205157 3004 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm6819-201ENSMUST00000185325 1891 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm26344-201ENSMUST00000104553 132 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm5228-201ENSMUST00000117186 357 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm13229-201ENSMUST00000118238 340 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm13542-201ENSMUST00000118484 637 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm11997-201ENSMUST00000118697 313 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm9434-201ENSMUST00000118975 813 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm11760-201ENSMUST00000122355 796 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm19840-201ENSMUST00000169624 882 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm6100-201ENSMUST00000180253 403 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Trbv9-201ENSMUST00000194494 290 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 4930553I04Rik-201ENSMUST00000196722 670 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC5.99□□□□□ -1.45
Hmgb3O54879 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm5609-201ENSMUST00000210008 1267 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm45432-201ENSMUST00000210391 416 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm45782-201ENSMUST00000212670 366 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm4178-201ENSMUST00000218307 649 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 AC192091.1-201ENSMUST00000218668 439 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm8394-201ENSMUST00000079684 952 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Hmgb3O54879 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm43225-201ENSMUST00000201381 1439 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.99□□□□□ -1.45
Hmgb3O54879 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm15681-201ENSMUST00000137501 2704 ntBASIC5.98□□□□□ -1.45
Hmgb3O54879 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Ighv2-4-201ENSMUST00000103447 350 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms