Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Gm24824-201ENSMUST00000175097 78 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Gm25617-201ENSMUST00000179548 133 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Gm7412-201ENSMUST00000191692 605 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Gm25617-202ENSMUST00000198387 132 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Gm44279-201ENSMUST00000205154 472 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Gm18960-201ENSMUST00000222962 713 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 AC161275.1-201ENSMUST00000224668 208 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Gm37200-201ENSMUST00000193689 2172 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Clrn2B2RVW2 AC168056.4-201ENSMUST00000223835 2567 ntBASIC8.63□□□□□ -1.03
Clrn2B2RVW2 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm12187-201ENSMUST00000119584 1375 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm12713-201ENSMUST00000118404 764 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm12929-201ENSMUST00000122406 370 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm3585-201ENSMUST00000173438 875 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm42782-201ENSMUST00000197286 522 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm9267-201ENSMUST00000222831 404 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 CT030238.4-202ENSMUST00000226143 745 ntBASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Clrn2B2RVW2 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Gm44080-201ENSMUST00000204451 2214 ntBASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Gm14990-201ENSMUST00000122354 445 ntBASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC8.61□□□□□ -1.03
Clrn2B2RVW2 Gm16138-201ENSMUST00000159341 821 ntBASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms