Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp2aQ9DB34 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 AC154270.2-201ENSMUST00000226755 2306 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm26831-201ENSMUST00000181458 1380 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm15665-201ENSMUST00000119116 847 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm16057-201ENSMUST00000120811 759 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm24893-201ENSMUST00000122745 369 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm17973-201ENSMUST00000174509 520 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm29240-201ENSMUST00000187248 286 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm38063-201ENSMUST00000193990 342 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm8077-201ENSMUST00000209221 1024 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm11282-201ENSMUST00000119018 1416 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm37321-201ENSMUST00000195742 1872 ntBASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp2aQ9DB34 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Gm37995-201ENSMUST00000194958 1714 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Gm25276-201ENSMUST00000104300 124 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 n-R5s9-201ENSMUST00000104432 117 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Gm6491-201ENSMUST00000118273 990 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Mir1932-201ENSMUST00000157390 90 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Mir7011-201ENSMUST00000183768 73 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Gm28164-201ENSMUST00000190143 442 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Gm37225-201ENSMUST00000193423 325 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 CT009539.1-201ENSMUST00000226465 220 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 BC085271-201ENSMUST00000191852 1487 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.73□□□□□ -1.17
Chmp2aQ9DB34 AC154482.1-201ENSMUST00000223248 2483 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms