Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Serpina1a-202ENSMUST00000085056 1360 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim42Q9D2H5 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim42Q9D2H5 AC154207.1-201ENSMUST00000221924 1483 ntBASIC8.17□□□□□ -1.1
Trim42Q9D2H5 AC187103.1-202ENSMUST00000223904 1536 ntBASIC8.17□□□□□ -1.1
Trim42Q9D2H5 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.17□□□□□ -1.1
Trim42Q9D2H5 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim42Q9D2H5 Hdac9-203ENSMUST00000209667 1635 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim42Q9D2H5 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Trim42Q9D2H5 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim42Q9D2H5 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim42Q9D2H5 Gm10650-202ENSMUST00000196581 1969 ntBASIC8.17□□□□□ -1.1
Trim42Q9D2H5 BC051077-201ENSMUST00000181440 2044 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim42Q9D2H5 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.17□□□□□ -1.1
Trim42Q9D2H5 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim42Q9D2H5 AC122346.1-202ENSMUST00000225586 2116 ntBASIC8.17□□□□□ -1.1
Trim42Q9D2H5 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim42Q9D2H5 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm17132-201ENSMUST00000109542 1158 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm13423-201ENSMUST00000117205 888 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm12598-201ENSMUST00000117333 830 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm14607-201ENSMUST00000119119 491 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm23317-201ENSMUST00000157999 129 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm23046-201ENSMUST00000158369 284 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm2666-201ENSMUST00000160587 891 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Cyb5a-205ENSMUST00000163083 676 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 n-R5s210-201ENSMUST00000177688 119 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm20918-201ENSMUST00000179629 684 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm22347-201ENSMUST00000180276 132 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm6946-201ENSMUST00000182237 987 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm26929-201ENSMUST00000182703 753 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 E130114P18Rik-209ENSMUST00000186369 306 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm29142-201ENSMUST00000188009 696 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm28508-201ENSMUST00000188016 696 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm1988-201ENSMUST00000188190 2565 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm19224-201ENSMUST00000190477 793 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm28927-201ENSMUST00000191528 272 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm6558-201ENSMUST00000191934 1973 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm37486-201ENSMUST00000195663 405 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm45238-201ENSMUST00000210204 517 ntTSL 2 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 AC119987.1-201ENSMUST00000212316 848 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 AC124577.1-201ENSMUST00000214044 487 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm18892-201ENSMUST00000217628 881 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 AC147615.1-201ENSMUST00000218914 441 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 AC122357.2-201ENSMUST00000220732 1525 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm8278-201ENSMUST00000222840 1121 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 AC134860.3-201ENSMUST00000223564 1300 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 AC147250.1-201ENSMUST00000224781 1364 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 AC125523.1-201ENSMUST00000228018 934 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm26397-201ENSMUST00000083703 134 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim42Q9D2H5 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms