Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm38120-201ENSMUST00000195506 4642 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm22934-201ENSMUST00000103961 132 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm24334-201ENSMUST00000104210 128 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm14864-201ENSMUST00000116164 1087 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm13254-201ENSMUST00000118295 654 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm13323-201ENSMUST00000120245 1151 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Trav8-2-201ENSMUST00000130122 337 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm17828-201ENSMUST00000183380 799 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm18970-201ENSMUST00000186040 938 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm28180-201ENSMUST00000189608 722 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm37371-201ENSMUST00000194837 392 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm18504-201ENSMUST00000220917 929 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 AL590616.1-201ENSMUST00000223339 574 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 AC121997.2-202ENSMUST00000227158 939 ntBASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nup35Q8R4R6 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm10855-201ENSMUST00000100426 2541 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm6767-201ENSMUST00000118650 1381 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm22271-201ENSMUST00000104035 128 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm25232-201ENSMUST00000104502 132 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm15913-201ENSMUST00000118492 331 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm12875-201ENSMUST00000118745 344 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 AA623943-201ENSMUST00000121794 354 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm11188-201ENSMUST00000122382 388 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm24899-201ENSMUST00000158892 73 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm7211-201ENSMUST00000172692 1118 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm22408-201ENSMUST00000174925 65 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm27018-201ENSMUST00000181136 225 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm26977-201ENSMUST00000183151 996 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Mir6340-201ENSMUST00000183857 119 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm27288-201ENSMUST00000184215 80 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm27597-201ENSMUST00000184365 80 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm27506-201ENSMUST00000184558 80 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm27529-201ENSMUST00000184975 80 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm27907-201ENSMUST00000185101 80 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm5251-201ENSMUST00000188959 472 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Gm43805-201ENSMUST00000198488 824 ntBASIC5.95□□□□□ -1.46
Nup35Q8R4R6 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nup35Q8R4R6 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms