Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm43331-201ENSMUST00000197991 1689 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm25614-201ENSMUST00000104013 133 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm15778-201ENSMUST00000118469 608 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm22795-201ENSMUST00000157233 118 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm42938-201ENSMUST00000198414 1072 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm7419-201ENSMUST00000209962 925 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm5791-201ENSMUST00000220840 489 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 AC139941.1-201ENSMUST00000221517 478 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 CT009539.1-201ENSMUST00000226465 220 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Gm37382-201ENSMUST00000193032 1596 ntBASIC9.4□□□□□ -0.9
Ccdc60Q8C4J0 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccdc60Q8C4J0 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccdc60Q8C4J0 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccdc60Q8C4J0 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccdc60Q8C4J0 Gm37043-201ENSMUST00000194609 3105 ntBASIC9.4□□□□□ -0.91
Ccdc60Q8C4J0 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccdc60Q8C4J0 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccdc60Q8C4J0 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Ccdc60Q8C4J0 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccdc60Q8C4J0 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 CT025639.1-201ENSMUST00000223906 1375 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm25083-201ENSMUST00000102319 92 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm22438-201ENSMUST00000104049 132 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm12306-201ENSMUST00000117256 171 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm14584-201ENSMUST00000118956 637 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm11320-201ENSMUST00000119434 463 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm11850-201ENSMUST00000119679 479 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm15362-201ENSMUST00000121459 388 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm17047-201ENSMUST00000167709 430 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm43812-202ENSMUST00000202701 581 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm5314-201ENSMUST00000204852 466 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm44760-201ENSMUST00000206375 1173 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm18503-201ENSMUST00000220340 728 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Rian-209ENSMUST00000182406 3476 ntBASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccdc60Q8C4J0 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm43168-201ENSMUST00000201039 1612 ntBASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm26945-201ENSMUST00000183191 2011 ntBASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm37460-201ENSMUST00000191796 2249 ntBASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm13414-201ENSMUST00000117516 727 ntBASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm8916-201ENSMUST00000119732 949 ntBASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm14380-201ENSMUST00000122298 431 ntBASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC9.38□□□□□ -0.91
Ccdc60Q8C4J0 Gm8305-201ENSMUST00000180022 1195 ntBASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms