Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Champ1-202ENSMUST00000128557 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm42942-201ENSMUST00000196086 1328 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 4930503E24Rik-201ENSMUST00000219167 1333 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 AC132465.1-201ENSMUST00000219938 1307 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Nanog-202ENSMUST00000112580 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Klf10-201ENSMUST00000074043 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm22934-201ENSMUST00000103961 132 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm25762-201ENSMUST00000103984 132 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm25725-201ENSMUST00000104528 130 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm15715-201ENSMUST00000118032 283 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Mup-ps14-201ENSMUST00000118437 532 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm12421-201ENSMUST00000119071 307 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm5393-201ENSMUST00000119106 272 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Mup-ps10-201ENSMUST00000119626 556 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm23117-201ENSMUST00000158482 108 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm25413-201ENSMUST00000158544 312 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm28894-201ENSMUST00000185214 615 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm18033-201ENSMUST00000186678 550 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm37369-201ENSMUST00000194179 615 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm36996-201ENSMUST00000194466 250 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm44234-201ENSMUST00000204246 900 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gm18892-201ENSMUST00000217628 881 ntBASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 AU021092-201ENSMUST00000050160 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Prpf38bQ80SY5 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm28307-201ENSMUST00000190685 2694 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 AC168056.3-201ENSMUST00000225395 2540 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Hdhd2-207ENSMUST00000147332 1705 ntTSL 5 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Lrrc49-202ENSMUST00000065603 3017 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Olfr155-202ENSMUST00000107860 3480 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm42613-201ENSMUST00000199975 1931 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Igkv2-112-202ENSMUST00000103319 358 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Trav9n-4-201ENSMUST00000103626 595 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm9050-201ENSMUST00000119501 448 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm12222-201ENSMUST00000121368 260 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm23195-201ENSMUST00000158814 129 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm16102-201ENSMUST00000160955 420 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm2951-201ENSMUST00000169447 490 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm29068-201ENSMUST00000191607 400 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm38213-201ENSMUST00000193203 173 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm44053-201ENSMUST00000203364 929 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm5307-201ENSMUST00000204772 760 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm19182-201ENSMUST00000207139 577 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 AC131654.1-201ENSMUST00000219675 745 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 Gm18243-201ENSMUST00000220756 887 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 AC134254.3-201ENSMUST00000223533 575 ntBASIC8.57□□□□□ -1.04
Prpf38bQ80SY5 CT025603.3-201ENSMUST00000224031 419 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms