Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mir669e-201ENSMUST00000117003 119 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm11865-201ENSMUST00000118093 859 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Fau-ps2-201ENSMUST00000119333 371 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm6798-201ENSMUST00000119961 360 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm14860-201ENSMUST00000120277 429 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm14599-201ENSMUST00000120469 474 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm12178-201ENSMUST00000120545 330 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm15362-201ENSMUST00000121459 388 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm13649-201ENSMUST00000122325 606 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Arpp21-221ENSMUST00000162065 2996 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm17235-201ENSMUST00000169128 964 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Col8a1Q00780 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Mir8099-2-201ENSMUST00000183568 127 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 1500004A13Rik-205ENSMUST00000184014 2135 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Mir8099-1-201ENSMUST00000184238 127 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm29355-201ENSMUST00000188178 697 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm28953-201ENSMUST00000188336 697 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm20788-201ENSMUST00000190538 697 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm37395-201ENSMUST00000194721 697 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm43709-201ENSMUST00000199870 559 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm44809-201ENSMUST00000208305 993 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC6.81□□□□□ -1.32
Col8a1Q00780 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.81□□□□□ -1.32
Col8a1Q00780 AC163295.2-202ENSMUST00000227763 1053 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Rad51ap1-201ENSMUST00000112220 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm37649-201ENSMUST00000192079 2232 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm43465-201ENSMUST00000200367 2802 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm7942-201ENSMUST00000163216 1500 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Pikfyve-202ENSMUST00000097707 6641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Arl6-201ENSMUST00000023405 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Hist2h2be-201ENSMUST00000090781 2620 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 CT009480.1-201ENSMUST00000225771 4480 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm24472-201ENSMUST00000104484 132 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm15754-201ENSMUST00000119191 478 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm13754-201ENSMUST00000120486 998 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm6689-201ENSMUST00000130905 481 ntBASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm12932-201ENSMUST00000143705 620 ntTSL 3 BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col8a1Q00780 Gm22224-201ENSMUST00000157357 93 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms