Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm38373-201ENSMUST00000192042 288 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm7341-201ENSMUST00000192183 926 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm37260-201ENSMUST00000193748 1251 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm4525-201ENSMUST00000198831 254 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm44856-201ENSMUST00000206639 304 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC9.5□□□□□ -0.89
Smarcc1P97496 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC9.5□□□□□ -0.89
Smarcc1P97496 AC161275.1-201ENSMUST00000224668 208 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 AV026068-229ENSMUST00000225516 595 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 AC110176.1-201ENSMUST00000226219 504 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Gpr87-201ENSMUST00000056898 1080 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm10388-201ENSMUST00000205001 2936 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm13423-201ENSMUST00000117205 888 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm14659-201ENSMUST00000117667 843 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm6142-201ENSMUST00000120290 325 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm12903-201ENSMUST00000121015 544 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm12477-201ENSMUST00000121221 571 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm25843-201ENSMUST00000122582 314 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Mir7084-201ENSMUST00000183876 70 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Mir8105-201ENSMUST00000184718 89 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm29013-201ENSMUST00000187431 237 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm28117-201ENSMUST00000188472 371 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm9114-201ENSMUST00000188558 997 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm18980-201ENSMUST00000199098 1079 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Smarcc1P97496 AC192091.1-201ENSMUST00000218668 439 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Prl7a1-203ENSMUST00000224852 1283 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm10123-201ENSMUST00000075723 490 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smarcc1P97496 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC9.49□□□□□ -0.89
Smarcc1P97496 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smarcc1P97496 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm24057-201ENSMUST00000158616 302 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm26505-201ENSMUST00000176208 166 ntBASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms