Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC105958.1-201ENSMUST00000214783 2144 ntBASIC8.13□□□□□ -1.11
CiitaP79621 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.13□□□□□ -1.11
CiitaP79621 Gm6667-201ENSMUST00000217169 564 ntBASIC8.13□□□□□ -1.11
CiitaP79621 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.13□□□□□ -1.11
CiitaP79621 Gm5791-201ENSMUST00000220840 489 ntBASIC8.13□□□□□ -1.11
CiitaP79621 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.13□□□□□ -1.11
CiitaP79621 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.13□□□□□ -1.11
CiitaP79621 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.13□□□□□ -1.11
CiitaP79621 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.13□□□□□ -1.11
CiitaP79621 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CiitaP79621 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CiitaP79621 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CiitaP79621 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
CiitaP79621 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CiitaP79621 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CiitaP79621 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CiitaP79621 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CiitaP79621 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.13□□□□□ -1.11
CiitaP79621 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CiitaP79621 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CiitaP79621 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CiitaP79621 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CiitaP79621 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CiitaP79621 Gm18957-201ENSMUST00000197623 1813 ntBASIC8.13□□□□□ -1.11
CiitaP79621 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Dgkh-204ENSMUST00000227767 3319 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.12□□□□□ -1.11
CiitaP79621 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 AC159624.1-201ENSMUST00000217762 1344 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC8.12□□□□□ -1.11
CiitaP79621 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CiitaP79621 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CiitaP79621 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CiitaP79621 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.12□□□□□ -1.11
CiitaP79621 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
CiitaP79621 Gm15644-201ENSMUST00000121764 387 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Gm5611-201ENSMUST00000164523 852 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Gm8046-201ENSMUST00000172151 616 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Mir6403-201ENSMUST00000185007 129 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Gm29240-201ENSMUST00000187248 286 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.12□□□□□ -1.11
CiitaP79621 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Gm7341-201ENSMUST00000192183 926 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.12□□□□□ -1.11
CiitaP79621 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC8.12□□□□□ -1.11
CiitaP79621 Gm29759-201ENSMUST00000205860 327 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.12□□□□□ -1.11
CiitaP79621 Gm19092-201ENSMUST00000209036 969 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.12□□□□□ -1.11
CiitaP79621 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC8.12□□□□□ -1.11
CiitaP79621 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.12□□□□□ -1.11
CiitaP79621 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC8.12□□□□□ -1.11
CiitaP79621 CT009713.5-201ENSMUST00000224508 909 ntBASIC8.12□□□□□ -1.11
CiitaP79621 AC154692.1-202ENSMUST00000226632 1231 ntBASIC8.12□□□□□ -1.11
CiitaP79621 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CiitaP79621 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CiitaP79621 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CiitaP79621 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CiitaP79621 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CiitaP79621 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.12□□□□□ -1.11
CiitaP79621 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CiitaP79621 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.11□□□□□ -1.11
CiitaP79621 Gm37891-201ENSMUST00000195585 1326 ntBASIC8.11□□□□□ -1.11
CiitaP79621 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms