Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx3P48381 Gm5605-201ENSMUST00000208940 1305 ntBASIC6.73□□□□□ -1.33
Rfx3P48381 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Rfx3P48381 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx3P48381 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Rfx3P48381 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx3P48381 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.73□□□□□ -1.33
Rfx3P48381 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rfx3P48381 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.72□□□□□ -1.33
Rfx3P48381 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm8644-201ENSMUST00000118619 596 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm8084-201ENSMUST00000120807 752 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm12967-201ENSMUST00000122147 289 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm26407-201ENSMUST00000158504 307 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC6.72□□□□□ -1.33
Rfx3P48381 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm10012-202ENSMUST00000170379 372 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm9286-201ENSMUST00000173586 508 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rfx3P48381 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rfx3P48381 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm26784-201ENSMUST00000181666 410 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm29273-201ENSMUST00000188880 262 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm29562-201ENSMUST00000190113 904 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm5541-201ENSMUST00000193248 1113 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm37339-201ENSMUST00000194142 392 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm43555-201ENSMUST00000196588 310 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm19254-201ENSMUST00000204828 294 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm32842-201ENSMUST00000212653 738 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm4898-201ENSMUST00000218519 832 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rfx3P48381 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rfx3P48381 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.72□□□□□ -1.33
Rfx3P48381 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Rfx3P48381 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.72□□□□□ -1.33
Rfx3P48381 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Rfx3P48381 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Rfx3P48381 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Rfx3P48381 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Rfx3P48381 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Rfx3P48381 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Rfx3P48381 AC132384.7-201ENSMUST00000220198 1391 ntBASIC6.71□□□□□ -1.33
Rfx3P48381 Phf7-206ENSMUST00000228437 1373 ntBASIC6.71□□□□□ -1.33
Rfx3P48381 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Rfx3P48381 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Rfx3P48381 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.33
Rfx3P48381 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Rfx3P48381 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Rfx3P48381 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.71□□□□□ -1.33
Rfx3P48381 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx3P48381 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx3P48381 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx3P48381 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx3P48381 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx3P48381 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Rfx3P48381 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Rfx3P48381 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC6.71□□□□□ -1.34
Rfx3P48381 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Rfx3P48381 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Rfx3P48381 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx3P48381 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Rfx3P48381 Gm24195-201ENSMUST00000116804 137 ntBASIC6.71□□□□□ -1.34
Rfx3P48381 Gm13552-201ENSMUST00000118837 417 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms