Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm6004-201ENSMUST00000173237 1116 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC9.27□□□□□ -0.93
Rfx1P48377 Gm23413-201ENSMUST00000175521 125 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Gm27043-201ENSMUST00000182807 958 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC9.27□□□□□ -0.93
Rfx1P48377 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC9.27□□□□□ -0.93
Rfx1P48377 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rfx1P48377 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rfx1P48377 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC9.27□□□□□ -0.93
Rfx1P48377 Gm7442-201ENSMUST00000197778 383 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC9.27□□□□□ -0.93
Rfx1P48377 Gm30835-201ENSMUST00000198825 689 ntTSL 3 BASIC9.27□□□□□ -0.93
Rfx1P48377 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC9.27□□□□□ -0.93
Rfx1P48377 Gm42964-201ENSMUST00000202965 382 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC9.27□□□□□ -0.93
Rfx1P48377 Gm44508-201ENSMUST00000206943 1157 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC9.27□□□□□ -0.93
Rfx1P48377 Gm45636-201ENSMUST00000210497 1064 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Rfx1P48377 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Rfx1P48377 AC154219.1-201ENSMUST00000220764 1262 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Gm10054-201ENSMUST00000223362 431 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 AC116596.2-201ENSMUST00000226642 526 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 AC121542.1-201ENSMUST00000227245 721 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 AC122035.2-201ENSMUST00000228698 462 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Rfx1P48377 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Rfx1P48377 Elobl-202ENSMUST00000082339 300 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Gm14802-201ENSMUST00000121944 1885 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC9.27□□□□□ -0.93
Rfx1P48377 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rfx1P48377 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rfx1P48377 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Rfx1P48377 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rfx1P48377 Gm37332-201ENSMUST00000195853 2844 ntBASIC9.27□□□□□ -0.93
Rfx1P48377 Rbm26-204ENSMUST00000163545 3270 ntTSL 5 BASIC9.27□□□□□ -0.93
Rfx1P48377 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 AC154482.1-201ENSMUST00000223248 2483 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC9.26□□□□□ -0.93
Rfx1P48377 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm13526-201ENSMUST00000117970 189 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Gm14682-201ENSMUST00000117977 524 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Gm12310-201ENSMUST00000118013 492 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Gm5761-201ENSMUST00000119238 834 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm5389-201ENSMUST00000120893 1176 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC9.26□□□□□ -0.93
Rfx1P48377 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Mir6374-201ENSMUST00000184003 107 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm28983-201ENSMUST00000186685 614 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm28150-201ENSMUST00000187305 614 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Gm21742-201ENSMUST00000189352 548 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Gm28377-201ENSMUST00000189695 720 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Gm37822-201ENSMUST00000192618 1109 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Gm42454-201ENSMUST00000196805 1181 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Gm32102-201ENSMUST00000196885 241 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC9.26□□□□□ -0.93
Rfx1P48377 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm8667-201ENSMUST00000211112 449 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 AC122774.1-201ENSMUST00000227703 762 ntBASIC9.26□□□□□ -0.93
Rfx1P48377 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Rfx1P48377 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Rfx1P48377 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC9.26□□□□□ -0.93
Rfx1P48377 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rfx1P48377 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Rfx1P48377 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms