Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Dalir-201ENSMUST00000188773 2170 ntBASIC7.58□□□□□ -1.2
HttP42859 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC7.58□□□□□ -1.2
HttP42859 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
HttP42859 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Gm13400-201ENSMUST00000117436 380 ntBASIC7.58□□□□□ -1.2
HttP42859 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
HttP42859 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
HttP42859 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC7.58□□□□□ -1.2
HttP42859 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
HttP42859 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.58□□□□□ -1.2
HttP42859 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.58□□□□□ -1.2
HttP42859 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.58□□□□□ -1.2
HttP42859 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
HttP42859 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.58□□□□□ -1.2
HttP42859 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC7.58□□□□□ -1.2
HttP42859 Gm26429-201ENSMUST00000104829 110 ntBASIC7.58□□□□□ -1.2
HttP42859 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Gm14938-201ENSMUST00000119482 943 ntBASIC7.58□□□□□ -1.2
HttP42859 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.58□□□□□ -1.2
HttP42859 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
HttP42859 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.58□□□□□ -1.2
HttP42859 Gm28846-201ENSMUST00000189161 368 ntBASIC7.58□□□□□ -1.2
HttP42859 Gm3351-201ENSMUST00000193454 505 ntBASIC7.58□□□□□ -1.2
HttP42859 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.58□□□□□ -1.2
HttP42859 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
HttP42859 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
HttP42859 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 CT010505.3-201ENSMUST00000227835 1651 ntBASIC7.57□□□□□ -1.2
HttP42859 Slco5a1-204ENSMUST00000136197 5123 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
HttP42859 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
HttP42859 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.57□□□□□ -1.2
HttP42859 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.57□□□□□ -1.2
HttP42859 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
HttP42859 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
HttP42859 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Gm7676-201ENSMUST00000084055 319 ntBASIC7.57□□□□□ -1.2
HttP42859 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
HttP42859 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC7.57□□□□□ -1.2
HttP42859 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Gm45705-201ENSMUST00000211831 2134 ntBASIC7.57□□□□□ -1.2
HttP42859 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
HttP42859 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.57□□□□□ -1.2
HttP42859 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.57□□□□□ -1.2
HttP42859 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.57□□□□□ -1.2
HttP42859 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
HttP42859 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.57□□□□□ -1.2
HttP42859 Gm28023-201ENSMUST00000184556 60 ntBASIC7.57□□□□□ -1.2
HttP42859 Gm27825-201ENSMUST00000184586 60 ntBASIC7.57□□□□□ -1.2
HttP42859 Gm7891-201ENSMUST00000190284 843 ntBASIC7.57□□□□□ -1.2
HttP42859 Gm43850-201ENSMUST00000202021 578 ntBASIC7.57□□□□□ -1.2
HttP42859 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.57□□□□□ -1.2
HttP42859 AC154532.1-201ENSMUST00000227860 965 ntBASIC7.57□□□□□ -1.2
HttP42859 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Gm26442-201ENSMUST00000082588 153 ntBASIC7.57□□□□□ -1.2
HttP42859 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
HttP42859 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.57□□□□□ -1.2
HttP42859 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
HttP42859 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
HttP42859 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Gm22676-201ENSMUST00000116972 129 ntBASIC7.56□□□□□ -1.2
HttP42859 Gm12773-201ENSMUST00000120134 587 ntBASIC7.56□□□□□ -1.2
HttP42859 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Gm24228-201ENSMUST00000158829 129 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms