Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.74□□□□□ -1.17
Cxcl12P40224 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.74□□□□□ -1.17
Cxcl12P40224 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.74□□□□□ -1.17
Cxcl12P40224 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.74□□□□□ -1.17
Cxcl12P40224 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.74□□□□□ -1.17
Cxcl12P40224 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.74□□□□□ -1.17
Cxcl12P40224 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.74□□□□□ -1.17
Cxcl12P40224 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC7.74□□□□□ -1.17
Cxcl12P40224 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.73□□□□□ -1.17
Cxcl12P40224 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.73□□□□□ -1.17
Cxcl12P40224 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.73□□□□□ -1.17
Cxcl12P40224 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm7289-201ENSMUST00000168993 734 ntBASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm26505-201ENSMUST00000176208 166 ntBASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm28885-201ENSMUST00000185615 563 ntBASIC7.73□□□□□ -1.17
Cxcl12P40224 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.73□□□□□ -1.17
Cxcl12P40224 AC122372.1-201ENSMUST00000215344 280 ntBASIC7.73□□□□□ -1.17
Cxcl12P40224 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm42519-201ENSMUST00000199282 3656 ntBASIC7.73□□□□□ -1.17
Cxcl12P40224 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm45873-201ENSMUST00000211865 1915 ntBASIC7.73□□□□□ -1.17
Cxcl12P40224 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Tmem19-209ENSMUST00000219890 2949 ntTSL 5 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Gm37159-201ENSMUST00000192720 3605 ntBASIC7.73□□□□□ -1.17
Cxcl12P40224 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cxcl12P40224 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Cxcl12P40224 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Cxcl12P40224 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Cxcl12P40224 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Sec23a-204ENSMUST00000165134 2529 ntTSL 5 BASIC7.72□□□□□ -1.17
Cxcl12P40224 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Cxcl12P40224 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm22374-201ENSMUST00000104583 132 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm14116-201ENSMUST00000117733 805 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm14869-201ENSMUST00000119007 884 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm12593-201ENSMUST00000120981 743 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm17022-201ENSMUST00000166415 922 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.72□□□□□ -1.17
Cxcl12P40224 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm20128-201ENSMUST00000196189 417 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC7.72□□□□□ -1.17
Cxcl12P40224 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC7.72□□□□□ -1.17
Cxcl12P40224 AC167013.4-201ENSMUST00000226712 317 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Cxcl12P40224 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm23734-201ENSMUST00000083753 109 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Cxcl12P40224 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC7.72□□□□□ -1.17
Cxcl12P40224 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm42897-201ENSMUST00000201486 2112 ntBASIC7.72□□□□□ -1.17
Cxcl12P40224 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cxcl12P40224 Cdh8-204ENSMUST00000142129 2711 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 482 ms