Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.62□□□□□ -1.35
P20040 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
P20040 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
P20040 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
P20040 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
P20040 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
P20040 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Gm28497-201ENSMUST00000189646 3029 ntBASIC6.61□□□□□ -1.35
P20040 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.61□□□□□ -1.35
P20040 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
P20040 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.61□□□□□ -1.35
P20040 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Gm8644-201ENSMUST00000118619 596 ntBASIC6.61□□□□□ -1.35
P20040 Gm4918-201ENSMUST00000119420 1084 ntBASIC6.61□□□□□ -1.35
P20040 Gm12967-201ENSMUST00000122147 289 ntBASIC6.61□□□□□ -1.35
P20040 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC6.61□□□□□ -1.35
P20040 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC6.61□□□□□ -1.35
P20040 Gm23164-201ENSMUST00000175084 111 ntBASIC6.61□□□□□ -1.35
P20040 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.61□□□□□ -1.35
P20040 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC6.61□□□□□ -1.35
P20040 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC6.61□□□□□ -1.35
P20040 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Gm18349-201ENSMUST00000187440 904 ntBASIC6.61□□□□□ -1.35
P20040 Gm7200-201ENSMUST00000188426 1163 ntBASIC6.61□□□□□ -1.35
P20040 Gm5251-201ENSMUST00000188959 472 ntBASIC6.61□□□□□ -1.35
P20040 Gm29195-201ENSMUST00000189038 379 ntBASIC6.61□□□□□ -1.35
P20040 Gm5541-201ENSMUST00000193248 1113 ntBASIC6.61□□□□□ -1.35
P20040 Gm19035-202ENSMUST00000194575 959 ntBASIC6.61□□□□□ -1.35
P20040 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC6.61□□□□□ -1.35
P20040 Gm40319-201ENSMUST00000199785 481 ntBASIC6.61□□□□□ -1.35
P20040 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC6.61□□□□□ -1.35
P20040 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC6.61□□□□□ -1.35
P20040 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.61□□□□□ -1.35
P20040 Gm9289-201ENSMUST00000221269 606 ntBASIC6.61□□□□□ -1.35
P20040 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC6.61□□□□□ -1.35
P20040 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC6.61□□□□□ -1.35
P20040 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Gm6807-201ENSMUST00000077435 888 ntBASIC6.61□□□□□ -1.35
P20040 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
P20040 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
P20040 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
P20040 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.61□□□□□ -1.35
P20040 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
P20040 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
P20040 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
P20040 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC6.61□□□□□ -1.35
P20040 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
P20040 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
P20040 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
P20040 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
P20040 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.6□□□□□ -1.35
P20040 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
P20040 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
P20040 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
P20040 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
P20040 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.6□□□□□ -1.35
P20040 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
P20040 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
P20040 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
P20040 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.6□□□□□ -1.35
P20040 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
P20040 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
P20040 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
P20040 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
P20040 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
P20040 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
P20040 Gm12219-201ENSMUST00000119198 443 ntBASIC6.6□□□□□ -1.35
P20040 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
P20040 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC6.6□□□□□ -1.35
P20040 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.6□□□□□ -1.35
P20040 Gm24883-201ENSMUST00000158391 281 ntBASIC6.6□□□□□ -1.35
P20040 Gm19840-201ENSMUST00000169624 882 ntBASIC6.6□□□□□ -1.35
P20040 Gm24824-201ENSMUST00000175097 78 ntBASIC6.6□□□□□ -1.35
P20040 n-R5s115-201ENSMUST00000179019 119 ntBASIC6.6□□□□□ -1.35
P20040 Gm27595-201ENSMUST00000184579 112 ntBASIC6.6□□□□□ -1.35
P20040 Txn-ps1-201ENSMUST00000186385 309 ntBASIC6.6□□□□□ -1.35
P20040 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 188.8 ms