Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm31230-201ENSMUST00000199725 785 ntBASIC6.88□□□□□ -1.31
Hoxd3P09027 Gm43224-201ENSMUST00000201567 898 ntBASIC6.88□□□□□ -1.31
Hoxd3P09027 Gm29848-201ENSMUST00000203107 295 ntBASIC6.88□□□□□ -1.31
Hoxd3P09027 Gm9967-202ENSMUST00000205660 361 ntTSL 3 BASIC6.88□□□□□ -1.31
Hoxd3P09027 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.88□□□□□ -1.31
Hoxd3P09027 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.88□□□□□ -1.31
Hoxd3P09027 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.88□□□□□ -1.31
Hoxd3P09027 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC6.88□□□□□ -1.31
Hoxd3P09027 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.88□□□□□ -1.31
Hoxd3P09027 Gm33929-201ENSMUST00000221762 367 ntTSL 5 BASIC6.88□□□□□ -1.31
Hoxd3P09027 AC154506.2-201ENSMUST00000225481 1276 ntBASIC6.88□□□□□ -1.31
Hoxd3P09027 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.88□□□□□ -1.31
Hoxd3P09027 Gm24826-201ENSMUST00000083695 215 ntBASIC6.88□□□□□ -1.31
Hoxd3P09027 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Hoxd3P09027 Slc12a4-202ENSMUST00000116429 3755 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Ptger2-201ENSMUST00000046891 3684 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC6.88□□□□□ -1.31
Hoxd3P09027 Cd99l2-202ENSMUST00000080035 3327 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Retsat-201ENSMUST00000070597 3027 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Zfp677-201ENSMUST00000056107 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Mavs-201ENSMUST00000041362 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.88□□□□□ -1.31
Hoxd3P09027 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Mrpl15-206ENSMUST00000156816 4203 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Dnttip2-201ENSMUST00000035776 2429 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Orai2-202ENSMUST00000196454 3990 ntTSL 5 BASIC6.88□□□□□ -1.31
Hoxd3P09027 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
Hoxd3P09027 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Hoxd3P09027 Gm37699-201ENSMUST00000194753 3338 ntBASIC6.88□□□□□ -1.31
Hoxd3P09027 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Hoxd3P09027 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Gm44848-201ENSMUST00000207808 3234 ntBASIC6.88□□□□□ -1.31
Hoxd3P09027 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Hoxd3P09027 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm19683-201ENSMUST00000209748 1781 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Cyp2d22-201ENSMUST00000023083 2771 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Glul-201ENSMUST00000086199 2792 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Ltf-201ENSMUST00000035077 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 BC025920-204ENSMUST00000121138 1611 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Palb2-202ENSMUST00000098068 3750 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Sag-209ENSMUST00000177757 1584 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Rtl4-202ENSMUST00000112843 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 AC121286.2-201ENSMUST00000218069 2470 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Tmem181b-ps-202ENSMUST00000180035 2426 ntTSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Cpne8-202ENSMUST00000064391 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm12093-201ENSMUST00000120906 1405 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 G3bp2-201ENSMUST00000113127 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm28453-202ENSMUST00000185975 1337 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Mink1-204ENSMUST00000102558 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Cyb5d2-203ENSMUST00000156294 2158 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Slc30a6-201ENSMUST00000024870 2156 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Ighv1-55-201ENSMUST00000103526 415 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm14158-201ENSMUST00000118409 308 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Rpl17-ps8-201ENSMUST00000118924 621 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm12837-201ENSMUST00000120131 373 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 E230016K23Rik-201ENSMUST00000125626 2139 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm22158-201ENSMUST00000158411 126 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm16236-201ENSMUST00000159588 379 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm15833-201ENSMUST00000161563 957 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Sorbs1-204ENSMUST00000165469 2145 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 4930579G18Rik-201ENSMUST00000167763 968 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Mir5135-201ENSMUST00000174997 79 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm8488-201ENSMUST00000176112 1280 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm3591-202ENSMUST00000179312 396 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm8824-201ENSMUST00000182962 990 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm8183-201ENSMUST00000183134 980 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Sbp-207ENSMUST00000183252 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm8976-201ENSMUST00000187136 703 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms