Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm6083-201ENSMUST00000075518 357 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Olfr120-201ENSMUST00000077498 993 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Mir484-201ENSMUST00000093566 67 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm12904-201ENSMUST00000117451 1399 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm44550-201ENSMUST00000207311 2058 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Hmgb3O54879 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Hmgb3O54879 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.01□□□□□ -1.45
Hmgb3O54879 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
Hmgb3O54879 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm45832-201ENSMUST00000212762 1443 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm23131-201ENSMUST00000104253 132 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm23129-201ENSMUST00000104259 132 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm14891-201ENSMUST00000117378 596 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC6.01□□□□□ -1.45
Hmgb3O54879 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm25442-201ENSMUST00000177270 92 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Mir7659-201ENSMUST00000184079 58 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm28864-201ENSMUST00000189251 644 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm42779-201ENSMUST00000198807 406 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm19161-201ENSMUST00000217958 737 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC6.01□□□□□ -1.45
Hmgb3O54879 AC124465.1-201ENSMUST00000222349 746 ntTSL 3 BASIC6.01□□□□□ -1.45
Hmgb3O54879 AC122774.1-201ENSMUST00000227703 762 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm17083-201ENSMUST00000165849 1366 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm43158-201ENSMUST00000198484 1555 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.01□□□□□ -1.45
Hmgb3O54879 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Hmgb3O54879 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmgb3O54879 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6□□□□□ -1.45
Hmgb3O54879 Gm45084-201ENSMUST00000207096 1957 ntBASIC6□□□□□ -1.45
Hmgb3O54879 Gm43707-201ENSMUST00000196451 3187 ntBASIC6□□□□□ -1.45
Hmgb3O54879 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Hmgb3O54879 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hmgb3O54879 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6□□□□□ -1.45
Hmgb3O54879 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Hmgb3O54879 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Hmgb3O54879 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Hmgb3O54879 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hmgb3O54879 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Hmgb3O54879 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hmgb3O54879 Gm25501-201ENSMUST00000104429 132 ntBASIC6□□□□□ -1.45
Hmgb3O54879 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Hmgb3O54879 Gm5389-201ENSMUST00000120893 1176 ntBASIC6□□□□□ -1.45
Hmgb3O54879 Gm11765-201ENSMUST00000121173 1205 ntBASIC6□□□□□ -1.45
Hmgb3O54879 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC6□□□□□ -1.45
Hmgb3O54879 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6□□□□□ -1.45
Hmgb3O54879 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Hmgb3O54879 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC6□□□□□ -1.45
Hmgb3O54879 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hmgb3O54879 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC6□□□□□ -1.45
Hmgb3O54879 Gm23011-202ENSMUST00000197855 275 ntBASIC6□□□□□ -1.45
Hmgb3O54879 Igkv8-22-201ENSMUST00000199501 367 ntBASIC6□□□□□ -1.45
Hmgb3O54879 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC6□□□□□ -1.45
Hmgb3O54879 Gm16273-201ENSMUST00000202238 268 ntBASIC6□□□□□ -1.45
Hmgb3O54879 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hmgb3O54879 Gm45887-201ENSMUST00000212672 2998 ntBASIC6□□□□□ -1.45
Hmgb3O54879 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms