Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.26□□□□□ -1.25
Cstf3Q99LI7 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Cstf3Q99LI7 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Cstf3Q99LI7 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Cstf3Q99LI7 Gm43970-201ENSMUST00000204346 3605 ntBASIC7.26□□□□□ -1.25
Cstf3Q99LI7 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Cstf3Q99LI7 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 BC085271-201ENSMUST00000191852 1487 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm22661-201ENSMUST00000104192 132 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm14509-201ENSMUST00000117312 1286 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm14891-201ENSMUST00000117378 596 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm11203-201ENSMUST00000122169 741 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm17129-201ENSMUST00000168168 505 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm8893-201ENSMUST00000172146 1242 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm6931-201ENSMUST00000183103 371 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm5835-201ENSMUST00000185806 1270 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm37469-201ENSMUST00000193728 890 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm18995-201ENSMUST00000202981 520 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm45399-201ENSMUST00000209955 1016 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm16072-201ENSMUST00000119574 2377 ntBASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
Cstf3Q99LI7 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm38195-201ENSMUST00000194247 1499 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm11895-201ENSMUST00000122165 467 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm37247-201ENSMUST00000192549 730 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm42424-201ENSMUST00000198319 376 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm16475-202ENSMUST00000209033 528 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm18192-201ENSMUST00000210174 941 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 AC069562.1-201ENSMUST00000224206 434 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm42678-201ENSMUST00000197163 2221 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.24□□□□□ -1.25
Cstf3Q99LI7 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms