Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.82□□□□□ -1
Nup88Q8CEC0 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Nup88Q8CEC0 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Nup88Q8CEC0 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.82□□□□□ -1
Nup88Q8CEC0 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.82□□□□□ -1
Nup88Q8CEC0 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.82□□□□□ -1
Nup88Q8CEC0 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.82□□□□□ -1
Nup88Q8CEC0 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC8.82□□□□□ -1
Nup88Q8CEC0 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.82□□□□□ -1
Nup88Q8CEC0 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.82□□□□□ -1
Nup88Q8CEC0 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.82□□□□□ -1
Nup88Q8CEC0 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC8.82□□□□□ -1
Nup88Q8CEC0 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Nup88Q8CEC0 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.82□□□□□ -1
Nup88Q8CEC0 Gm43235-201ENSMUST00000200121 297 ntBASIC8.82□□□□□ -1
Nup88Q8CEC0 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.82□□□□□ -1
Nup88Q8CEC0 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.82□□□□□ -1
Nup88Q8CEC0 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.82□□□□□ -1
Nup88Q8CEC0 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC8.82□□□□□ -1
Nup88Q8CEC0 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.82□□□□□ -1
Nup88Q8CEC0 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Nup88Q8CEC0 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Nup88Q8CEC0 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.82□□□□□ -1
Nup88Q8CEC0 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Nup88Q8CEC0 Gm44178-201ENSMUST00000205229 2930 ntBASIC8.82□□□□□ -1
Nup88Q8CEC0 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Nup88Q8CEC0 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Nup88Q8CEC0 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.82□□□□□ -1
Nup88Q8CEC0 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC8.82□□□□□ -1
Nup88Q8CEC0 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Nup88Q8CEC0 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Nup88Q8CEC0 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.82□□□□□ -1
Nup88Q8CEC0 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.82□□□□□ -1
Nup88Q8CEC0 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC8.82□□□□□ -1
Nup88Q8CEC0 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 Klf10-202ENSMUST00000226363 2917 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 AC124572.1-201ENSMUST00000218155 2406 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm12851-201ENSMUST00000117920 421 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm15665-201ENSMUST00000119116 847 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm22687-201ENSMUST00000158301 105 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm19815-201ENSMUST00000175818 335 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm26587-201ENSMUST00000180795 989 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm37469-201ENSMUST00000193728 890 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.81□□□□□ -1
Nup88Q8CEC0 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.81□□□□□ -1
Nup88Q8CEC0 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 AC130673.1-201ENSMUST00000227992 435 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm37980-201ENSMUST00000194420 1910 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Nup88Q8CEC0 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.81□□□□□ -1
Nup88Q8CEC0 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
Nup88Q8CEC0 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.8□□□□□ -1
Nup88Q8CEC0 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gm37067-201ENSMUST00000195730 1628 ntBASIC8.8□□□□□ -1
Nup88Q8CEC0 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.8□□□□□ -1
Nup88Q8CEC0 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC8.8□□□□□ -1
Nup88Q8CEC0 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.8□□□□□ -1
Nup88Q8CEC0 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gm13038-201ENSMUST00000119886 459 ntBASIC8.8□□□□□ -1
Nup88Q8CEC0 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms