Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Gm6187-201ENSMUST00000040649 960 ntBASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Olfr319-201ENSMUST00000076965 921 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Ube2nl-201ENSMUST00000085228 456 ntBASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Gm10029-201ENSMUST00000089635 330 ntBASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Tac1-201ENSMUST00000090679 980 ntTSL 5 BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Nrg4-213ENSMUST00000164721 1927 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Olfm5-201ENSMUST00000051137 2268 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Uroc1-202ENSMUST00000164761 3462 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 AC154347.1-201ENSMUST00000221358 3105 ntBASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Ublcp1-201ENSMUST00000102795 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 AC101875.1-201ENSMUST00000222666 2223 ntBASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC8.6□□□□□ -1.03
Prpf38bQ80SY5 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 AC107232.1-201ENSMUST00000227785 1503 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Prkaa2-201ENSMUST00000030243 7969 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm12378-201ENSMUST00000116171 1461 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Tnf-202ENSMUST00000167924 1462 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Zfp260-201ENSMUST00000050735 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Trav5-4-201ENSMUST00000103664 343 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Obp2b-201ENSMUST00000114192 732 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm7785-201ENSMUST00000117121 892 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm7129-201ENSMUST00000117402 997 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm25839-201ENSMUST00000158921 103 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 H2-M10.4-202ENSMUST00000169950 996 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm29462-201ENSMUST00000191458 288 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm20072-201ENSMUST00000202231 292 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm31520-201ENSMUST00000203048 733 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm44088-201ENSMUST00000204595 237 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm6909-201ENSMUST00000209825 989 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 AC122372.1-201ENSMUST00000215344 280 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm19987-201ENSMUST00000216339 499 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm7986-201ENSMUST00000221336 551 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 CT009556.3-201ENSMUST00000226173 513 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 AC140406.2-201ENSMUST00000227539 481 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 AC154806.1-202ENSMUST00000227949 885 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 AC114585.2-203ENSMUST00000228400 339 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Cd40lg-201ENSMUST00000033466 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 9330162B11Rik-201ENSMUST00000195397 2212 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Eps15-202ENSMUST00000102729 5190 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm44317-201ENSMUST00000204314 4214 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 CT010465.1-202ENSMUST00000221816 1355 ntTSL 5 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Prpf38bQ80SY5 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.04
Prpf38bQ80SY5 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Prpf38bQ80SY5 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.04
Prpf38bQ80SY5 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms