Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm11338-201ENSMUST00000120086 1160 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm12804-201ENSMUST00000121030 999 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm14826-201ENSMUST00000121284 901 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm15538-201ENSMUST00000121410 313 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smarcc1P97496 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC9.52□□□□□ -0.89
Smarcc1P97496 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm22847-201ENSMUST00000157707 105 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm24680-201ENSMUST00000158759 126 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm23007-201ENSMUST00000158951 177 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm23139-201ENSMUST00000179454 132 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm27034-201ENSMUST00000182552 940 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm27178-201ENSMUST00000184962 340 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm28439-201ENSMUST00000187714 876 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm43071-201ENSMUST00000197233 2032 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smarcc1P97496 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC9.52□□□□□ -0.89
Smarcc1P97496 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm19217-201ENSMUST00000218238 328 ntBASIC9.52□□□□□ -0.89
Smarcc1P97496 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smarcc1P97496 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smarcc1P97496 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm42656-201ENSMUST00000201506 2305 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smarcc1P97496 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm45354-201ENSMUST00000199820 2557 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm11903-201ENSMUST00000118958 727 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm13221-201ENSMUST00000121712 430 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Mir1900-201ENSMUST00000122714 78 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm5656-201ENSMUST00000171020 1096 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm29605-201ENSMUST00000190800 292 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm37017-201ENSMUST00000195266 747 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm8679-201ENSMUST00000210651 1036 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm4247-201ENSMUST00000211441 1042 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC9.51□□□□□ -0.89
Smarcc1P97496 CT010480.3-201ENSMUST00000224712 259 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Smarcc1P97496 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm42546-201ENSMUST00000201584 2592 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm18537-202ENSMUST00000206215 1503 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC9.51□□□□□ -0.89
Smarcc1P97496 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smarcc1P97496 Gm10623-201ENSMUST00000209081 2639 ntBASIC9.51□□□□□ -0.89
Smarcc1P97496 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm13260-201ENSMUST00000117797 1264 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm15192-201ENSMUST00000121005 293 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm15644-201ENSMUST00000121764 387 ntBASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC9.5□□□□□ -0.89
Smarcc1P97496 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smarcc1P97496 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms