Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm24063-201ENSMUST00000157491 105 ntBASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm26070-201ENSMUST00000157500 137 ntBASIC8.56□□□□□ -1.04
Hmgb1P63158 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Hmgb1P63158 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm6750-201ENSMUST00000189273 268 ntBASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm37929-201ENSMUST00000195116 493 ntBASIC8.56□□□□□ -1.04
Hmgb1P63158 Mir7230-201ENSMUST00000195977 56 ntBASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC8.56□□□□□ -1.04
Hmgb1P63158 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm44603-201ENSMUST00000206820 367 ntBASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm45900-201ENSMUST00000211879 409 ntBASIC8.56□□□□□ -1.04
Hmgb1P63158 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Hmgb1P63158 AC154738.3-201ENSMUST00000227953 409 ntBASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm25129-201ENSMUST00000082651 133 ntBASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm10029-201ENSMUST00000089635 330 ntBASIC8.56□□□□□ -1.04
Hmgb1P63158 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hmgb1P63158 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Hmgb1P63158 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Hmgb1P63158 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Hmgb1P63158 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm38126-201ENSMUST00000195297 4003 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb1P63158 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm12611-201ENSMUST00000119452 1037 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb1P63158 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb1P63158 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm24561-201ENSMUST00000175182 95 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm29471-201ENSMUST00000190527 700 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb1P63158 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm44431-201ENSMUST00000203500 413 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Apoc1-204ENSMUST00000207978 339 ntTSL 3 BASIC8.55□□□□□ -1.04
Hmgb1P63158 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm4800-201ENSMUST00000215776 1266 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm17875-201ENSMUST00000216005 941 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 AC147615.1-201ENSMUST00000218914 441 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
Hmgb1P63158 AC159205.7-201ENSMUST00000225988 692 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 AC126028.1-201ENSMUST00000226218 2123 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm37140-201ENSMUST00000192914 1684 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.55□□□□□ -1.04
Hmgb1P63158 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb1P63158 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb1P63158 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC8.55□□□□□ -1.04
Hmgb1P63158 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb1P63158 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb1P63158 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm12608-201ENSMUST00000122013 1715 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms