Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm14509-201ENSMUST00000117312 1286 ntBASIC7.44□□□□□ -1.22
Fdft1P53798 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.44□□□□□ -1.22
Fdft1P53798 Gm7678-201ENSMUST00000181879 943 ntBASIC7.44□□□□□ -1.22
Fdft1P53798 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC7.44□□□□□ -1.22
Fdft1P53798 Gm43023-201ENSMUST00000197583 2106 ntBASIC7.44□□□□□ -1.22
Fdft1P53798 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Fdft1P53798 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC7.44□□□□□ -1.22
Fdft1P53798 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 Gm32842-201ENSMUST00000212653 738 ntBASIC7.44□□□□□ -1.22
Fdft1P53798 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC7.44□□□□□ -1.22
Fdft1P53798 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 Gm40853-201ENSMUST00000221342 582 ntBASIC7.44□□□□□ -1.22
Fdft1P53798 Gm9255-201ENSMUST00000223225 581 ntBASIC7.44□□□□□ -1.22
Fdft1P53798 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Fdft1P53798 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Fdft1P53798 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.44□□□□□ -1.22
Fdft1P53798 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Fdft1P53798 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Fdft1P53798 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Fdft1P53798 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Fdft1P53798 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Fdft1P53798 Gm44509-201ENSMUST00000205400 1324 ntBASIC7.44□□□□□ -1.22
Fdft1P53798 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Fdft1P53798 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC7.44□□□□□ -1.22
Fdft1P53798 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Fdft1P53798 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Fdft1P53798 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Fdft1P53798 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
Fdft1P53798 Gm26014-201ENSMUST00000104405 132 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Gm12844-201ENSMUST00000119463 582 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC7.43□□□□□ -1.22
Fdft1P53798 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC7.43□□□□□ -1.22
Fdft1P53798 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC7.43□□□□□ -1.22
Fdft1P53798 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Gm24530-201ENSMUST00000157948 288 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC7.43□□□□□ -1.22
Fdft1P53798 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Mir1897-202ENSMUST00000198006 79 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Gm42424-201ENSMUST00000198319 376 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 AC163296.1-202ENSMUST00000218395 661 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 AC163296.1-201ENSMUST00000220004 1266 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Gm18243-201ENSMUST00000220756 887 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 AC163041.2-201ENSMUST00000223082 573 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 AC130673.1-201ENSMUST00000227992 435 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Mir484-201ENSMUST00000093566 67 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Fdft1P53798 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.43□□□□□ -1.22
Fdft1P53798 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 AC166341.5-201ENSMUST00000222206 1400 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.43□□□□□ -1.22
Fdft1P53798 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Gm37483-201ENSMUST00000194382 1484 ntBASIC7.43□□□□□ -1.22
Fdft1P53798 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Fdft1P53798 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Fdft1P53798 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Fdft1P53798 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.42□□□□□ -1.22
Fdft1P53798 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Fdft1P53798 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Fdft1P53798 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.42□□□□□ -1.22
Fdft1P53798 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Fdft1P53798 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Fdft1P53798 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.42□□□□□ -1.22
Fdft1P53798 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Fdft1P53798 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Fdft1P53798 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Fdft1P53798 Gm42678-201ENSMUST00000197163 2221 ntBASIC7.42□□□□□ -1.22
Fdft1P53798 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Fdft1P53798 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Fdft1P53798 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 135.8 ms