Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cux1P53564 Gm14035-201ENSMUST00000117596 1475 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Cux1P53564 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Cux1P53564 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Gm7134-201ENSMUST00000122296 2406 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Gm29048-201ENSMUST00000185342 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29403-201ENSMUST00000185491 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28234-201ENSMUST00000185657 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28248-201ENSMUST00000186093 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29633-202ENSMUST00000186217 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28829-201ENSMUST00000186231 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28261-201ENSMUST00000186417 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28983-201ENSMUST00000186685 614 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28815-201ENSMUST00000186751 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28608-201ENSMUST00000186860 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28122-201ENSMUST00000187088 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28150-201ENSMUST00000187305 614 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28420-201ENSMUST00000187340 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28106-201ENSMUST00000187640 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28698-201ENSMUST00000187734 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29224-201ENSMUST00000187965 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29189-201ENSMUST00000188018 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29476-201ENSMUST00000188397 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29505-201ENSMUST00000188424 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28125-201ENSMUST00000188470 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29391-201ENSMUST00000188545 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29280-201ENSMUST00000188571 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28349-201ENSMUST00000188590 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29652-201ENSMUST00000188622 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Gm28819-206ENSMUST00000188816 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29079-201ENSMUST00000188875 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28213-201ENSMUST00000189183 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29382-201ENSMUST00000189549 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29377-205ENSMUST00000189603 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28327-201ENSMUST00000189638 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28790-201ENSMUST00000189642 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28907-201ENSMUST00000189700 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29586-207ENSMUST00000189745 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29115-201ENSMUST00000189870 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28366-201ENSMUST00000190147 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29212-201ENSMUST00000190384 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29533-201ENSMUST00000190403 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28162-201ENSMUST00000190545 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29030-201ENSMUST00000190848 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28742-201ENSMUST00000191001 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28899-201ENSMUST00000191161 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29567-201ENSMUST00000191188 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28222-201ENSMUST00000191210 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28776-201ENSMUST00000191282 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29306-201ENSMUST00000191366 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29618-201ENSMUST00000191423 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28136-210ENSMUST00000191432 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm29251-201ENSMUST00000191480 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm28658-201ENSMUST00000191532 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm32180-201ENSMUST00000192415 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm30598-201ENSMUST00000192620 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm37627-201ENSMUST00000194585 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm34274-201ENSMUST00000195825 615 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC11.35□□□□□ -0.59
Cux1P53564 Gm9357-201ENSMUST00000207138 805 ntBASIC11.35□□□□□ -0.59
Cux1P53564 AC152922.1-201ENSMUST00000216518 1232 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm4808-201ENSMUST00000222283 1203 ntBASIC11.35□□□□□ -0.59
Cux1P53564 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC11.34□□□□□ -0.59
Cux1P53564 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC11.34□□□□□ -0.59
Cux1P53564 AC164433.1-201ENSMUST00000226138 1544 ntBASIC11.34□□□□□ -0.59
Cux1P53564 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cux1P53564 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Cux1P53564 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cux1P53564 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cux1P53564 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cux1P53564 AC156802.2-201ENSMUST00000225239 5740 ntBASIC11.34□□□□□ -0.59
Cux1P53564 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cux1P53564 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cux1P53564 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Cux1P53564 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cux1P53564 Gm25498-201ENSMUST00000104424 129 ntBASIC11.34□□□□□ -0.59
Cux1P53564 Gm12778-201ENSMUST00000122341 333 ntBASIC11.34□□□□□ -0.59
Cux1P53564 Gm6921-201ENSMUST00000161478 435 ntBASIC11.34□□□□□ -0.59
Cux1P53564 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cux1P53564 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cux1P53564 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC11.34□□□□□ -0.59
Cux1P53564 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cux1P53564 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cux1P53564 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.59
Cux1P53564 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC11.33□□□□□ -0.6
Cux1P53564 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms