Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.6□□□□□ -1.19
HttP42859 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.6□□□□□ -1.19
HttP42859 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
HttP42859 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
HttP42859 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 AC123832.1-201ENSMUST00000214120 2371 ntBASIC7.6□□□□□ -1.19
HttP42859 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC7.6□□□□□ -1.19
HttP42859 Gm26509-201ENSMUST00000180947 948 ntBASIC7.6□□□□□ -1.19
HttP42859 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
HttP42859 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
HttP42859 Timeless-206ENSMUST00000105245 4402 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
HttP42859 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Gm43071-201ENSMUST00000197233 2032 ntBASIC7.6□□□□□ -1.19
HttP42859 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.6□□□□□ -1.19
HttP42859 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Adgrl3-219ENSMUST00000122356 4853 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
HttP42859 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.59□□□□□ -1.19
HttP42859 Gm25445-201ENSMUST00000158996 299 ntBASIC7.59□□□□□ -1.19
HttP42859 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Gm24756-201ENSMUST00000177002 96 ntBASIC7.59□□□□□ -1.19
HttP42859 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Gm2950-201ENSMUST00000185530 520 ntBASIC7.59□□□□□ -1.19
HttP42859 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.59□□□□□ -1.19
HttP42859 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC7.59□□□□□ -1.19
HttP42859 Gm8929-201ENSMUST00000197781 1132 ntBASIC7.59□□□□□ -1.19
HttP42859 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC7.59□□□□□ -1.19
HttP42859 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
HttP42859 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.59□□□□□ -1.19
HttP42859 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Gm37069-201ENSMUST00000192742 4142 ntBASIC7.59□□□□□ -1.19
HttP42859 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC7.59□□□□□ -1.19
HttP42859 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC7.59□□□□□ -1.19
HttP42859 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Gm24719-201ENSMUST00000157520 110 ntBASIC7.59□□□□□ -1.19
HttP42859 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.59□□□□□ -1.19
HttP42859 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.59□□□□□ -1.19
HttP42859 Gm34149-201ENSMUST00000203547 304 ntBASIC7.59□□□□□ -1.19
HttP42859 Gm18600-201ENSMUST00000207205 505 ntBASIC7.59□□□□□ -1.19
HttP42859 Gm44919-201ENSMUST00000208587 1073 ntBASIC7.59□□□□□ -1.19
HttP42859 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.59□□□□□ -1.19
HttP42859 AV026068-216ENSMUST00000223874 328 ntBASIC7.59□□□□□ -1.19
HttP42859 AV026068-218ENSMUST00000223980 575 ntBASIC7.59□□□□□ -1.19
HttP42859 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Timeless-203ENSMUST00000105242 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC7.59□□□□□ -1.19
HttP42859 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HttP42859 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
HttP42859 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.59□□□□□ -1.2
HttP42859 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.59□□□□□ -1.2
HttP42859 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.59□□□□□ -1.2
HttP42859 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
HttP42859 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
HttP42859 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
HttP42859 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.59□□□□□ -1.2
HttP42859 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC7.59□□□□□ -1.2
HttP42859 Gm42462-201ENSMUST00000196543 1363 ntBASIC7.59□□□□□ -1.2
HttP42859 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.59□□□□□ -1.2
HttP42859 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
HttP42859 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
HttP42859 Gm23030-201ENSMUST00000158004 273 ntBASIC7.58□□□□□ -1.2
HttP42859 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC7.58□□□□□ -1.2
HttP42859 Gm8896-201ENSMUST00000197434 1106 ntBASIC7.58□□□□□ -1.2
HttP42859 Gm43905-201ENSMUST00000204516 204 ntBASIC7.58□□□□□ -1.2
HttP42859 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC7.58□□□□□ -1.2
HttP42859 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HttP42859 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 327.9 ms