Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gpr152-201ENSMUST00000096338 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd1P40201 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd1P40201 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd1P40201 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd1P40201 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd1P40201 Gm14712-201ENSMUST00000120195 772 ntBASIC11.04□□□□□ -0.64
Chd1P40201 Gm10913-201ENSMUST00000133732 463 ntBASIC11.04□□□□□ -0.64
Chd1P40201 Gm18690-201ENSMUST00000204488 985 ntBASIC11.04□□□□□ -0.64
Chd1P40201 AC154795.1-201ENSMUST00000225611 364 ntBASIC11.04□□□□□ -0.64
Chd1P40201 AC137902.1-201ENSMUST00000228184 102 ntBASIC11.04□□□□□ -0.64
Chd1P40201 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chd1P40201 AC168056.4-201ENSMUST00000223835 2567 ntBASIC11.03□□□□□ -0.64
Chd1P40201 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC11.03□□□□□ -0.64
Chd1P40201 Zkscan1-204ENSMUST00000110963 4670 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Smoc1-202ENSMUST00000110347 3496 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Chd1P40201 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chd1P40201 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC11.03□□□□□ -0.64
Chd1P40201 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Gm22210-201ENSMUST00000158101 144 ntBASIC11.03□□□□□ -0.64
Chd1P40201 Gm36939-201ENSMUST00000194889 439 ntBASIC11.03□□□□□ -0.64
Chd1P40201 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC11.03□□□□□ -0.64
Chd1P40201 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Mrpl15-206ENSMUST00000156816 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chd1P40201 Gm6493-201ENSMUST00000159889 1786 ntBASIC11.03□□□□□ -0.64
Chd1P40201 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chd1P40201 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Sez6-201ENSMUST00000000646 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Chd1P40201 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd1P40201 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC11.02□□□□□ -0.64
Chd1P40201 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chd1P40201 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chd1P40201 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.64
Chd1P40201 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.64
Chd1P40201 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd1P40201 Mbnl2-203ENSMUST00000226800 3328 ntBASIC11.02□□□□□ -0.64
Chd1P40201 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd1P40201 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd1P40201 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd1P40201 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC11.02□□□□□ -0.65
Chd1P40201 Mir697-201ENSMUST00000102316 109 ntBASIC11.02□□□□□ -0.65
Chd1P40201 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Chd1P40201 Gm22194-201ENSMUST00000116869 95 ntBASIC11.02□□□□□ -0.65
Chd1P40201 Gm15216-201ENSMUST00000118058 277 ntBASIC11.02□□□□□ -0.65
Chd1P40201 Gm5401-201ENSMUST00000122444 365 ntBASIC11.02□□□□□ -0.65
Chd1P40201 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd1P40201 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd1P40201 Gm2089-201ENSMUST00000218294 479 ntBASIC11.02□□□□□ -0.65
Chd1P40201 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Chd1P40201 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Chd1P40201 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Chd1P40201 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd1P40201 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd1P40201 AC162301.1-201ENSMUST00000228785 1542 ntBASIC11.02□□□□□ -0.65
Chd1P40201 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Chd1P40201 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd1P40201 Gm37829-201ENSMUST00000193864 2213 ntBASIC11.02□□□□□ -0.65
Chd1P40201 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Chd1P40201 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Chd1P40201 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd1P40201 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Chd1P40201 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd1P40201 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd1P40201 Gm11590-201ENSMUST00000118999 1455 ntBASIC11.01□□□□□ -0.65
Chd1P40201 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Chd1P40201 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd1P40201 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd1P40201 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Chd1P40201 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC11.01□□□□□ -0.65
Chd1P40201 Gm25246-201ENSMUST00000175476 69 ntBASIC11.01□□□□□ -0.65
Chd1P40201 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd1P40201 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC11.01□□□□□ -0.65
Chd1P40201 Gm28846-201ENSMUST00000189161 368 ntBASIC11.01□□□□□ -0.65
Chd1P40201 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
Chd1P40201 AC165292.1-201ENSMUST00000215218 620 ntBASIC11.01□□□□□ -0.65
Chd1P40201 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC11.01□□□□□ -0.65
Chd1P40201 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Chd1P40201 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd1P40201 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chd1P40201 Btg1-201ENSMUST00000038377 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd1P40201 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd1P40201 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd1P40201 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd1P40201 Gm2654-201ENSMUST00000221381 1592 ntBASIC11.01□□□□□ -0.65
Chd1P40201 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Chd1P40201 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd1P40201 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd1P40201 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms