Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm13255-201ENSMUST00000117255 547 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm11546-201ENSMUST00000120297 354 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm12121-201ENSMUST00000131630 500 ntTSL 3 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm28244-201ENSMUST00000189342 356 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm5190-201ENSMUST00000192434 357 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm8704-201ENSMUST00000197181 435 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm3922-201ENSMUST00000200519 435 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 AC113178.1-201ENSMUST00000227616 935 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 AC158519.1-201ENSMUST00000228615 179 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 4930553J12Rik-201ENSMUST00000023648 381 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 BC085271-201ENSMUST00000191852 1487 ntBASIC6.02□□□□□ -1.44
Hmgb3O54879 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.02□□□□□ -1.44
Hmgb3O54879 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Hmgb3O54879 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
Hmgb3O54879 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 CT009733.2-202ENSMUST00000224171 4748 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm9164-201ENSMUST00000118700 1014 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm11662-201ENSMUST00000121389 1193 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm6689-201ENSMUST00000130905 481 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm23403-201ENSMUST00000179169 110 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm8004-201ENSMUST00000187782 617 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm8510-201ENSMUST00000189202 895 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 1700065J18Rik-202ENSMUST00000190576 387 ntTSL 3 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm18699-201ENSMUST00000190713 243 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm38063-201ENSMUST00000193990 342 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm18972-201ENSMUST00000218873 630 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb3O54879 AC132468.1-201ENSMUST00000224706 499 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 CT010480.3-201ENSMUST00000224712 259 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 AC107452.2-201ENSMUST00000228415 363 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 CT009550.3-201ENSMUST00000228542 455 ntBASIC6.02□□□□□ -1.45
Hmgb3O54879 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms