Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC9.78□□□□□ -0.84
Ube3bQ9ES34 AC099629.1-201ENSMUST00000226778 464 ntBASIC9.78□□□□□ -0.84
Ube3bQ9ES34 AC140393.2-201ENSMUST00000226894 943 ntBASIC9.78□□□□□ -0.84
Ube3bQ9ES34 AC154239.2-201ENSMUST00000227859 233 ntBASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Gm22575-201ENSMUST00000082981 110 ntBASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Gm26003-201ENSMUST00000083061 113 ntBASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Tnfaip1-202ENSMUST00000108277 3768 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ube3bQ9ES34 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ube3bQ9ES34 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ube3bQ9ES34 AC155710.1-201ENSMUST00000219913 1353 ntBASIC9.77□□□□□ -0.84
Ube3bQ9ES34 Gm3742-201ENSMUST00000220907 1391 ntBASIC9.77□□□□□ -0.84
Ube3bQ9ES34 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ube3bQ9ES34 Optn-202ENSMUST00000114996 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm12310-201ENSMUST00000118013 492 ntBASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm12604-201ENSMUST00000118382 380 ntBASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm25807-201ENSMUST00000122783 305 ntBASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm17377-201ENSMUST00000165184 207 ntBASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm27163-201ENSMUST00000184767 409 ntBASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm42861-201ENSMUST00000199596 634 ntBASIC9.77□□□□□ -0.85
Ube3bQ9ES34 AC147096.1-201ENSMUST00000227648 352 ntBASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm9788-201ENSMUST00000057038 906 ntBASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm38001-201ENSMUST00000192900 3761 ntBASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm37069-201ENSMUST00000192742 4142 ntBASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Nbr1-207ENSMUST00000107218 3353 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Stambp-201ENSMUST00000068054 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ube3bQ9ES34 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Gm44802-201ENSMUST00000208026 1916 ntBASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Gm2098-201ENSMUST00000189146 1763 ntBASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Gm14528-201ENSMUST00000120615 231 ntBASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC9.76□□□□□ -0.85
Ube3bQ9ES34 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Gm6123-201ENSMUST00000193658 1069 ntBASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC9.76□□□□□ -0.85
Ube3bQ9ES34 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms