Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC9.48□□□□□ -0.89
Chmp4bQ9D8B3 Gm43534-201ENSMUST00000197685 2853 ntBASIC9.48□□□□□ -0.89
Chmp4bQ9D8B3 Gm43422-201ENSMUST00000199780 3571 ntBASIC9.48□□□□□ -0.89
Chmp4bQ9D8B3 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC9.48□□□□□ -0.89
Chmp4bQ9D8B3 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chmp4bQ9D8B3 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chmp4bQ9D8B3 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm38147-201ENSMUST00000192397 1798 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 BC002163-201ENSMUST00000121906 319 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm11895-201ENSMUST00000122165 467 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm22687-201ENSMUST00000158301 105 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Mir6922-201ENSMUST00000185099 66 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm9451-201ENSMUST00000188491 604 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm2089-201ENSMUST00000218294 479 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm5948-201ENSMUST00000219627 839 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm45925-202ENSMUST00000219904 1136 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 AC140208.1-201ENSMUST00000226609 285 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 AC134414.1-201ENSMUST00000228499 1221 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm9801-201ENSMUST00000054860 408 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Gm43398-201ENSMUST00000196584 2742 ntBASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chmp4bQ9D8B3 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC9.46□□□□□ -0.89
Chmp4bQ9D8B3 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Gm25167-201ENSMUST00000104188 120 ntBASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Gm15079-201ENSMUST00000121943 216 ntBASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Gm22262-201ENSMUST00000158713 86 ntBASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Gm16184-201ENSMUST00000162324 573 ntBASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Gm38203-201ENSMUST00000191815 245 ntBASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Gm8925-201ENSMUST00000197212 763 ntBASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Gm45454-201ENSMUST00000211484 455 ntBASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 AC102689.1-201ENSMUST00000220511 1090 ntBASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Chmp4bQ9D8B3 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms