Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm4863-201ENSMUST00000196907 1381 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm7647-201ENSMUST00000200996 1389 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm43023-201ENSMUST00000197583 2106 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm16221-201ENSMUST00000117331 393 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm13552-201ENSMUST00000118837 417 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm12034-201ENSMUST00000119032 399 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm12593-201ENSMUST00000120981 743 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm12967-201ENSMUST00000122147 289 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm26269-201ENSMUST00000180144 126 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm26980-201ENSMUST00000183321 395 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Mir6974-201ENSMUST00000184381 83 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm5251-201ENSMUST00000188959 472 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm5541-201ENSMUST00000193248 1113 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm19035-202ENSMUST00000194575 959 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm44508-201ENSMUST00000206943 1157 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm8058-201ENSMUST00000217247 587 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 AC137117.3-201ENSMUST00000226265 485 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm24143-201ENSMUST00000082633 145 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Use1Q9CQ56 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm44228-201ENSMUST00000204888 2026 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.04□□□□□ -1.28
Use1Q9CQ56 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Use1Q9CQ56 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Use1Q9CQ56 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Gm6350-201ENSMUST00000195099 1339 ntBASIC7.03□□□□□ -1.28
Use1Q9CQ56 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.03□□□□□ -1.28
Use1Q9CQ56 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Use1Q9CQ56 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.03□□□□□ -1.28
Use1Q9CQ56 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.03□□□□□ -1.28
Use1Q9CQ56 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Use1Q9CQ56 Gm11969-201ENSMUST00000118848 356 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms