Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm38300-201ENSMUST00000194245 1870 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm24576-201ENSMUST00000175508 248 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm7891-201ENSMUST00000190284 843 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm43013-201ENSMUST00000198216 247 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm40319-201ENSMUST00000199785 481 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm43235-201ENSMUST00000200121 297 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm31579-201ENSMUST00000203306 966 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim16Q99PP9 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 AC102689.1-201ENSMUST00000220511 1090 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm38315-201ENSMUST00000194286 2437 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 CT025619.3-201ENSMUST00000216299 3267 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm18305-201ENSMUST00000216532 2128 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm42462-201ENSMUST00000196543 1363 ntBASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim16Q99PP9 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm23529-201ENSMUST00000104562 132 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm12124-201ENSMUST00000120504 679 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm11954-201ENSMUST00000121403 349 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Mir1962-201ENSMUST00000157516 121 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm29273-201ENSMUST00000188880 262 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm28728-201ENSMUST00000189087 405 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm43815-201ENSMUST00000197676 990 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm18207-201ENSMUST00000205486 526 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm4259-201ENSMUST00000206489 758 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm18378-201ENSMUST00000216245 628 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm7493-201ENSMUST00000085919 626 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm16391-201ENSMUST00000086601 447 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.32□□□□□ -1.24
Trim16Q99PP9 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim16Q99PP9 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms