Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm12661-201ENSMUST00000118780 3335 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm38147-201ENSMUST00000192397 1798 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm13255-201ENSMUST00000117255 547 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm15047-201ENSMUST00000118891 454 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm11517-201ENSMUST00000119491 387 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm15160-201ENSMUST00000120553 907 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm6838-201ENSMUST00000172851 582 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm24923-201ENSMUST00000178201 88 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm37871-201ENSMUST00000194973 688 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm45299-201ENSMUST00000210199 420 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm8804-201ENSMUST00000212292 798 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Gm18226-201ENSMUST00000215261 521 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 AC165287.1-201ENSMUST00000224985 178 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Grik1-209ENSMUST00000227986 2942 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 AC154838.3-201ENSMUST00000228876 965 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Nup88Q8CEC0 AC166159.1-201ENSMUST00000227154 1380 ntBASIC8.84□□□□□ -0.99
Nup88Q8CEC0 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Nup88Q8CEC0 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Nup88Q8CEC0 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.84□□□□□ -1
Nup88Q8CEC0 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm15054-201ENSMUST00000117393 281 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm13495-201ENSMUST00000121156 537 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm4835-201ENSMUST00000155839 972 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm23663-201ENSMUST00000158045 80 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm24824-201ENSMUST00000175097 78 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm5973-201ENSMUST00000178542 496 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm6100-201ENSMUST00000180253 403 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.83□□□□□ -1
Nup88Q8CEC0 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.83□□□□□ -1
Nup88Q8CEC0 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.83□□□□□ -1
Nup88Q8CEC0 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.83□□□□□ -1
Nup88Q8CEC0 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms