Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm42489-201ENSMUST00000198964 669 ntBASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 AC165349.2-201ENSMUST00000219097 426 ntBASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 CT030175.1-201ENSMUST00000220822 408 ntBASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 AC129537.1-202ENSMUST00000226619 430 ntBASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Vmn1r41-204ENSMUST00000227039 985 ntBASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm44723-201ENSMUST00000207369 4000 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm13552-201ENSMUST00000118837 417 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm16523-201ENSMUST00000121253 592 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm14212-201ENSMUST00000122023 826 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm4246-201ENSMUST00000172822 216 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm9149-201ENSMUST00000182724 1007 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm37339-201ENSMUST00000194142 392 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm9110-201ENSMUST00000219035 617 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Gm5668-201ENSMUST00000220897 436 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ccdc38Q8CDN8 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Ccdc38Q8CDN8 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ccdc38Q8CDN8 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ccdc38Q8CDN8 Gm37151-201ENSMUST00000194631 5007 ntBASIC8.4□□□□□ -1.07
Ccdc38Q8CDN8 Gm5903-201ENSMUST00000121836 2325 ntBASIC8.4□□□□□ -1.07
Ccdc38Q8CDN8 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Ccdc38Q8CDN8 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 AC139754.2-201ENSMUST00000218037 1455 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Phf7-206ENSMUST00000228437 1373 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm11207-201ENSMUST00000117824 414 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm11895-201ENSMUST00000122165 467 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm24530-201ENSMUST00000157948 288 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Mir3078-201ENSMUST00000175231 87 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm24307-201ENSMUST00000178512 101 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm23945-201ENSMUST00000179609 92 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Mir6340-201ENSMUST00000183857 119 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms