Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm35608-201ENSMUST00000218472 2370 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm6823-201ENSMUST00000120791 1839 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 AC132474.1-201ENSMUST00000214407 3686 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Enox2-203ENSMUST00000114912 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm11565-201ENSMUST00000105053 921 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm25507-201ENSMUST00000116981 144 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm25372-201ENSMUST00000158161 255 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Glyatl3-201ENSMUST00000166343 873 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm27817-201ENSMUST00000184302 233 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.83□□□□□ -1.32
Col8a1Q00780 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm28142-201ENSMUST00000186899 698 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm28186-201ENSMUST00000187447 679 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Olfr1055-202ENSMUST00000188023 939 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm28443-201ENSMUST00000189081 698 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm38333-201ENSMUST00000193608 604 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm43849-201ENSMUST00000201086 215 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm9604-201ENSMUST00000211175 433 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm4977-201ENSMUST00000215709 1262 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC6.83□□□□□ -1.32
Col8a1Q00780 AC153526.1-201ENSMUST00000219750 190 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 AC123062.1-201ENSMUST00000221287 481 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 AC167192.4-201ENSMUST00000224087 993 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 AC129537.1-202ENSMUST00000226619 430 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm33994-201ENSMUST00000193724 2414 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Champ1-202ENSMUST00000128557 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 CT009515.4-201ENSMUST00000228165 1494 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Fgr-204ENSMUST00000171223 2398 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 St6gal1-206ENSMUST00000178797 4177 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 AC160637.1-201ENSMUST00000214037 3887 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Dnaic1-201ENSMUST00000102963 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Snhg14-206ENSMUST00000187666 2517 ntTSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Slc2a9-210ENSMUST00000155634 3164 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Nt5dc1-201ENSMUST00000047885 2743 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm42572-201ENSMUST00000202292 3378 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm44013-201ENSMUST00000204392 2262 ntBASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm38404-201ENSMUST00000202005 2496 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Pilrb2-201ENSMUST00000164886 1807 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC6.83□□□□□ -1.32
Col8a1Q00780 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col8a1Q00780 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms