Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC8.17□□□□□ -1.1
CiitaP79621 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 AC154482.1-201ENSMUST00000223248 2483 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Gm23527-201ENSMUST00000104570 130 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Gm16044-201ENSMUST00000118475 450 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Gm11926-201ENSMUST00000118520 430 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Gm11517-201ENSMUST00000119491 387 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Gm24422-201ENSMUST00000157800 119 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Gm26455-201ENSMUST00000175300 92 ntBASIC8.17□□□□□ -1.1
CiitaP79621 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CiitaP79621 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Gm26784-201ENSMUST00000181666 410 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CiitaP79621 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Gm8804-201ENSMUST00000212292 798 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.17□□□□□ -1.1
CiitaP79621 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.17□□□□□ -1.1
CiitaP79621 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CiitaP79621 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CiitaP79621 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CiitaP79621 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Gm18359-201ENSMUST00000173024 1459 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
CiitaP79621 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.17□□□□□ -1.1
CiitaP79621 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CiitaP79621 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Gm13224-201ENSMUST00000119586 94 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Gm5903-201ENSMUST00000121836 2325 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.16□□□□□ -1.1
CiitaP79621 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.16□□□□□ -1.1
CiitaP79621 Mir8094-201ENSMUST00000183361 117 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC8.16□□□□□ -1.1
CiitaP79621 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC8.16□□□□□ -1.1
CiitaP79621 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.16□□□□□ -1.1
CiitaP79621 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Gm34583-203ENSMUST00000202586 454 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.16□□□□□ -1.1
CiitaP79621 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Gm32842-201ENSMUST00000212653 738 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Gm4780-201ENSMUST00000213206 1242 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CiitaP79621 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CiitaP79621 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Gm37077-201ENSMUST00000195723 3691 ntBASIC8.16□□□□□ -1.1
CiitaP79621 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.16□□□□□ -1.1
CiitaP79621 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CiitaP79621 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CiitaP79621 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CiitaP79621 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CiitaP79621 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CiitaP79621 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
CiitaP79621 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CiitaP79621 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CiitaP79621 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
CiitaP79621 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CiitaP79621 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CiitaP79621 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.15□□□□□ -1.1
CiitaP79621 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CiitaP79621 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
CiitaP79621 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CiitaP79621 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms