Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.05□□□□□ -1.44
Hmgb3O54879 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hmgb3O54879 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hmgb3O54879 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Hmgb3O54879 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Hmgb3O54879 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.05□□□□□ -1.44
Hmgb3O54879 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hmgb3O54879 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hmgb3O54879 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.05□□□□□ -1.44
Hmgb3O54879 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.05□□□□□ -1.44
Hmgb3O54879 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm43623-201ENSMUST00000199289 2663 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Hmgb3O54879 AC122878.1-201ENSMUST00000227716 1460 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Lppos-201ENSMUST00000181640 1603 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm24542-201ENSMUST00000103870 110 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm26012-201ENSMUST00000104411 128 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm23946-201ENSMUST00000104423 197 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm15576-201ENSMUST00000117806 583 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm13407-201ENSMUST00000118256 360 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm10182-201ENSMUST00000178676 273 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Mir7669-201ENSMUST00000183442 58 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Mir6403-201ENSMUST00000185007 129 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Tspy-ps-203ENSMUST00000186546 989 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Scgb2b4-ps-201ENSMUST00000186705 340 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm30835-201ENSMUST00000198825 689 ntTSL 3 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm43103-201ENSMUST00000199021 802 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm18995-201ENSMUST00000202981 520 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm45299-201ENSMUST00000210199 420 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 AC153561.1-201ENSMUST00000215943 469 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm8058-201ENSMUST00000217247 587 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC6.04□□□□□ -1.44
Hmgb3O54879 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 CT009515.2-201ENSMUST00000226126 736 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb3O54879 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb3O54879 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.03□□□□□ -1.44
Hmgb3O54879 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb3O54879 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb3O54879 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms