Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm20819-201ENSMUST00000191091 925 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm20871-201ENSMUST00000191322 931 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm37960-201ENSMUST00000192402 1897 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 CT009711.1-201ENSMUST00000223992 3040 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm43221-201ENSMUST00000197612 2071 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm13702-201ENSMUST00000118542 825 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm12593-201ENSMUST00000120981 743 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm5401-201ENSMUST00000122444 365 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm25435-201ENSMUST00000158277 267 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm8424-201ENSMUST00000117716 988 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm15078-201ENSMUST00000118371 782 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm15616-201ENSMUST00000118662 375 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm36965-201ENSMUST00000193797 394 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Mir296-201ENSMUST00000083587 79 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
Cdh23Q99PF4 Gm43890-201ENSMUST00000203437 2799 ntBASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Iqcg-202ENSMUST00000115100 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Gm22795-201ENSMUST00000157233 118 ntBASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Gm7152-201ENSMUST00000163570 605 ntBASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Gm43233-201ENSMUST00000200491 616 ntBASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Gm18040-201ENSMUST00000217922 827 ntBASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Gm3678-201ENSMUST00000218888 492 ntBASIC7.3□□□□□ -1.24
Cdh23Q99PF4 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Gm21731-201ENSMUST00000079524 489 ntBASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.3□□□□□ -1.24
Cdh23Q99PF4 AC123832.1-201ENSMUST00000214120 2371 ntBASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Abcb1a-201ENSMUST00000047753 4997 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.3□□□□□ -1.24
Cdh23Q99PF4 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms