Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Gm25167-201ENSMUST00000104188 120 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Gm20702-201ENSMUST00000176181 460 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Gm5948-201ENSMUST00000219627 839 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 AC102689.1-201ENSMUST00000220511 1090 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Trim29Q8R2Q0 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm16221-201ENSMUST00000117331 393 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm11895-201ENSMUST00000122165 467 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm2951-201ENSMUST00000169447 490 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Mir1231-201ENSMUST00000175639 81 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm8529-201ENSMUST00000183298 745 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Mir8095-201ENSMUST00000185103 129 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm9451-201ENSMUST00000188491 604 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm38203-201ENSMUST00000191815 245 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Ighv1-38-201ENSMUST00000192755 349 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 AC137678.1-201ENSMUST00000198370 118 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm43542-201ENSMUST00000199505 379 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm18995-201ENSMUST00000202981 520 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 AC153936.1-201ENSMUST00000219874 395 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 AC140208.1-201ENSMUST00000226609 285 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm5316-201ENSMUST00000050391 270 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim29Q8R2Q0 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm14891-201ENSMUST00000117378 596 ntBASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm23027-201ENSMUST00000158771 158 ntBASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Mir3072-201ENSMUST00000175610 83 ntBASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm5445-201ENSMUST00000180224 480 ntBASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm21181-201ENSMUST00000186249 330 ntBASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm7436-201ENSMUST00000187229 391 ntBASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 AC163041.1-201ENSMUST00000221984 133 ntBASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms