Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm5251-201ENSMUST00000188959 472 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm36991-201ENSMUST00000191800 648 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm5708-201ENSMUST00000196289 886 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm5723-201ENSMUST00000203096 432 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm44245-201ENSMUST00000204304 232 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm19254-201ENSMUST00000204828 294 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm9110-201ENSMUST00000219035 617 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 AC159205.1-201ENSMUST00000225513 1099 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm8204-201ENSMUST00000185696 2144 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Grik1-210ENSMUST00000228034 2708 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm7502-201ENSMUST00000169235 733 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm26959-201ENSMUST00000182376 978 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm28941-201ENSMUST00000185536 1017 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm7369-201ENSMUST00000192738 936 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm4780-201ENSMUST00000213206 1242 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 AC173482.3-201ENSMUST00000225492 1212 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Gm28649-201ENSMUST00000189153 1581 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 AC124675.1-201ENSMUST00000226263 1390 ntBASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Nup88Q8CEC0 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Npr3-204ENSMUST00000228489 1969 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm25593-201ENSMUST00000102272 96 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm12642-201ENSMUST00000121098 876 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm23187-201ENSMUST00000175746 86 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm5698-201ENSMUST00000178317 724 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm27401-201ENSMUST00000184052 173 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm38170-201ENSMUST00000195404 816 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm8925-201ENSMUST00000197212 763 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm43040-201ENSMUST00000202399 558 ntBASIC8.85□□□□□ -0.99
Nup88Q8CEC0 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.85□□□□□ -0.99
Nup88Q8CEC0 Gm19161-201ENSMUST00000217958 737 ntBASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms