Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Foxc1Q61572 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Foxc1Q61572 Camk2a-202ENSMUST00000039904 1734 ntTSL 5 BASIC6.73□□□□□ -1.33
Foxc1Q61572 Vamp3-201ENSMUST00000030797 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Foxc1Q61572 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Foxc1Q61572 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Foxc1Q61572 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Foxc1Q61572 Tes-201ENSMUST00000076654 2685 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Foxc1Q61572 Gm38348-201ENSMUST00000191718 2273 ntBASIC6.73□□□□□ -1.33
Foxc1Q61572 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.73□□□□□ -1.33
Foxc1Q61572 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Adcy4-202ENSMUST00000170223 3501 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm43839-201ENSMUST00000196183 2325 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Olfr531-201ENSMUST00000080153 2320 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Rtp3-203ENSMUST00000199891 2463 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Myo1g-201ENSMUST00000003459 3307 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Pkd2l1-201ENSMUST00000042026 3321 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm38379-201ENSMUST00000194351 1525 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Kcnt1-215ENSMUST00000200434 3609 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm43161-201ENSMUST00000197020 1688 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm42987-201ENSMUST00000197115 2350 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm31024-201ENSMUST00000207600 2353 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 AC120425.1-201ENSMUST00000225213 2360 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Smcr8-202ENSMUST00000102667 3544 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Nanog-203ENSMUST00000112581 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm12481-201ENSMUST00000102482 297 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm14994-201ENSMUST00000117482 1092 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm11843-201ENSMUST00000118984 425 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm11546-201ENSMUST00000120297 354 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm12271-201ENSMUST00000121719 414 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm15111-201ENSMUST00000122142 878 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Myl12a-202ENSMUST00000123686 804 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm16145-201ENSMUST00000128807 583 ntTSL 2 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm16304-201ENSMUST00000129972 775 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Mup9-207ENSMUST00000132829 598 ntTSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.72□□□□□ -1.33
Foxc1Q61572 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm23205-201ENSMUST00000158671 103 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm4076-201ENSMUST00000179230 965 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm3454-201ENSMUST00000185571 412 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm28871-201ENSMUST00000186191 687 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm37559-201ENSMUST00000193556 832 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm32102-201ENSMUST00000196885 241 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm43694-201ENSMUST00000200773 1119 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm42887-201ENSMUST00000202469 1119 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm44331-201ENSMUST00000203217 388 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm44225-201ENSMUST00000203582 186 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm45134-201ENSMUST00000206046 1189 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm45126-201ENSMUST00000206702 960 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm38405-201ENSMUST00000207760 1140 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm45888-201ENSMUST00000212348 1229 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm19228-201ENSMUST00000214030 717 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm19219-201ENSMUST00000215863 724 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Rnf212b-201ENSMUST00000218311 1201 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 AC166263.1-201ENSMUST00000218586 238 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 AC131677.1-201ENSMUST00000218721 535 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 AC162376.1-201ENSMUST00000220120 435 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm18631-201ENSMUST00000223125 1043 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 AC129019.1-201ENSMUST00000223463 410 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Arl15-202ENSMUST00000224068 1002 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 CT025602.1-201ENSMUST00000227281 382 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 AC124709.1-201ENSMUST00000227296 620 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Mup11-201ENSMUST00000084544 601 ntTSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Rap1gds1-205ENSMUST00000196280 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms