Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm10705-201ENSMUST00000098980 461 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
Hmgb1P63158 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Hmgb1P63158 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Hmgb1P63158 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Hmgb1P63158 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Hmgb1P63158 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm21955-201ENSMUST00000194137 4968 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm24472-201ENSMUST00000104484 132 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm14930-201ENSMUST00000118864 652 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm12955-201ENSMUST00000119689 957 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 n-R5s76-201ENSMUST00000122700 113 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC8.59□□□□□ -1.03
Hmgb1P63158 Aamdc-214ENSMUST00000178078 723 ntTSL 2 BASIC8.59□□□□□ -1.03
Hmgb1P63158 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm28492-201ENSMUST00000190899 1019 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm8826-201ENSMUST00000193161 948 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm38337-201ENSMUST00000193986 599 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm32102-201ENSMUST00000196885 241 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC8.59□□□□□ -1.03
Hmgb1P63158 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC8.59□□□□□ -1.03
Hmgb1P63158 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC8.59□□□□□ -1.03
Hmgb1P63158 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Hmgb1P63158 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Hmgb1P63158 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC8.59□□□□□ -1.03
Hmgb1P63158 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.59□□□□□ -1.03
Hmgb1P63158 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Hmgb1P63158 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
Hmgb1P63158 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.04
Hmgb1P63158 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
Hmgb1P63158 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hmgb1P63158 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Hmgb1P63158 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.58□□□□□ -1.04
Hmgb1P63158 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Hmgb1P63158 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Hmgb1P63158 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Hmgb1P63158 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hmgb1P63158 Gm43088-201ENSMUST00000197530 2347 ntBASIC8.58□□□□□ -1.04
Hmgb1P63158 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Hmgb1P63158 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hmgb1P63158 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Hmgb1P63158 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Hmgb1P63158 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.58□□□□□ -1.04
Hmgb1P63158 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.58□□□□□ -1.04
Hmgb1P63158 Gm15209-201ENSMUST00000117703 400 ntBASIC8.58□□□□□ -1.04
Hmgb1P63158 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Hmgb1P63158 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC8.58□□□□□ -1.04
Hmgb1P63158 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Hmgb1P63158 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC8.58□□□□□ -1.04
Hmgb1P63158 Mir1932-201ENSMUST00000157390 90 ntBASIC8.58□□□□□ -1.04
Hmgb1P63158 Gm7211-201ENSMUST00000172692 1118 ntBASIC8.58□□□□□ -1.04
Hmgb1P63158 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms