Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rrp1P56183 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC8.42□□□□□ -1.06
Rrp1P56183 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rrp1P56183 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rrp1P56183 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rrp1P56183 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Rrp1P56183 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rrp1P56183 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm22811-201ENSMUST00000157468 154 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm9399-201ENSMUST00000175771 639 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Mir6919-201ENSMUST00000185146 62 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Gm38164-201ENSMUST00000192810 330 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Gm37678-201ENSMUST00000192908 1146 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Gm38063-201ENSMUST00000193990 342 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm42959-201ENSMUST00000202184 212 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm45756-201ENSMUST00000212491 407 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rrp1P56183 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC8.41□□□□□ -1.06
Rrp1P56183 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.41□□□□□ -1.06
Rrp1P56183 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Rrp1P56183 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rrp1P56183 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.4□□□□□ -1.06
Rrp1P56183 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.4□□□□□ -1.06
Rrp1P56183 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC8.4□□□□□ -1.06
Rrp1P56183 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.4□□□□□ -1.06
Rrp1P56183 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Rrp1P56183 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.4□□□□□ -1.06
Rrp1P56183 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rrp1P56183 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Gm4246-201ENSMUST00000172822 216 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Gm22408-201ENSMUST00000174925 65 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Gm26736-201ENSMUST00000180425 1236 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Gm18351-201ENSMUST00000188646 883 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC8.4□□□□□ -1.06
Rrp1P56183 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rrp1P56183 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Gm33096-201ENSMUST00000210189 493 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Gm45712-201ENSMUST00000212417 335 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 CT009546.3-201ENSMUST00000220914 208 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 AC092710.1-201ENSMUST00000221005 192 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Gm8616-201ENSMUST00000222175 1037 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 AC154649.2-201ENSMUST00000228189 808 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Gm5564-201ENSMUST00000034916 967 ntBASIC8.4□□□□□ -1.06
Rrp1P56183 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Rrp1P56183 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC8.4□□□□□ -1.06
Rrp1P56183 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.4□□□□□ -1.06
Rrp1P56183 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 377.8 ms